RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PPP4R1LQ9P1A2 415 aa7.91□□□□□ -1.14
TOPBP1-206ENST00000508524 ESYT3A0FGR9 886 aa7.9□□□□□ -1.14
TOPBP1-206ENST00000508524 GLRX3O76003 335 aaKnown RBP7.9□□□□□ -1.14
TOPBP1-206ENST00000508524 ZBTB48P10074 688 aaPredicted RBP7.9□□□□□ -1.14
TOPBP1-206ENST00000508524 IGFALSP35858 605 aa7.9□□□□□ -1.14
TOPBP1-206ENST00000508524 EPHB4P54760 987 aa7.9□□□□□ -1.14
TOPBP1-206ENST00000508524 IL13RA1P78552 427 aa7.9□□□□□ -1.14
TOPBP1-206ENST00000508524 REXO1L1PQ8IX06 675 aa7.9□□□□□ -1.14
TOPBP1-206ENST00000508524 C2orf69Q8N8R5 385 aa7.9□□□□□ -1.14
TOPBP1-206ENST00000508524 ASB15Q8WXK1 588 aa7.9□□□□□ -1.14
TOPBP1-206ENST00000508524 TNPO3Q9Y5L0 923 aaKnown RBP7.9□□□□□ -1.14
TOPBP1-206ENST00000508524 ZNF536O15090 1300 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 M0R2C6 588 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 B4GALT4O60513 344 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 ASMTLO95671 621 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 ASLP04424 464 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 SDSP20132 328 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 PPP2CBP62714 309 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 PPP2CAP67775 309 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 IRF9Q00978 393 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 TOP3AQ13472 1001 aaPredicted RBP7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 STILQ15468 1287 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 SPATS1Q496A3 300 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 DPP8Q6V1X1 898 aaPredicted RBP7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 GPR155Q7Z3F1 870 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 LIMS2Q7Z4I7 341 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 RALYLQ86SE5 291 aaKnown RBP7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 DDX53Q86TM3 631 aaKnown RBP7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 BOCQ9BWV1 1114 aa7.89□□□□□ -1.15
TOPBP1-206ENST00000508524 B4E1Z4 1266 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 FOXP2O15409 715 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 RFPL3O75679 317 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 ZNF888P0CJ79 500 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 POLD1P28340 1107 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 SDHAP31040 664 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 CATSPEREQ5SY80 951 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 LRSAM1Q6UWE0 723 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 WNK4Q96J92 1243 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 GBP4Q96PP9 640 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 UCKL1Q9NWZ5 548 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 SAMD15Q9P1V8 674 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 PTPN22Q9Y2R2 807 aa7.88□□□□□ -1.15
TOPBP1-206ENST00000508524 OPA1O60313 960 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 CNOT4O95628 575 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 ADRB1P08588 477 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 PABPC4Q13310 644 aaKnown RBP eCLIP7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 WDR72Q3MJ13 1102 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 KANK2Q63ZY3 851 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 ARHGEF18Q6ZSZ5 1173 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 CHST14Q8NCH0 376 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 SAMD11Q96NU1 681 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 PTPN18Q99952 460 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 BTBD2Q9BX70 525 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 MEGF9Q9H1U4 602 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 SLC4A7Q9Y6M7 1214 aa7.87□□□□□ -1.15
TOPBP1-206ENST00000508524 TRAF5O00463 557 aa7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 CUTAO60888 179 aa7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 HIP1RO75146 1068 aa7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 TMEM132BQ14DG7 1078 aa7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 ZNF827Q17R98 1081 aa7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 LCE5AQ5TCM9 118 aa7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 GLB1LQ6UWU2 654 aa7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 CXXC5Q7LFL8 322 aaKnown RBP7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 KRTAP3-1Q9BYR8 98 aa7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 SMPD4Q9NXE4 827 aa7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 ASB1Q9Y576 335 aa7.86□□□□□ -1.15
TOPBP1-206ENST00000508524 GPR42O15529 346 aa7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 ECE1P42892 770 aa7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 ETV4P43268 484 aa7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 MAGEA10P43363 369 aaPredicted RBP7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 USP10Q14694 798 aaKnown RBP7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 ARHGAP44Q17R89 818 aa7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 SYNPOQ8N3V7 929 aa7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 TTC9BQ8N6N2 239 aa7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 HIPK4Q8NE63 616 aa7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 CARD11Q9BXL7 1154 aa7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 ZDHHC5Q9C0B5 715 aa7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 OR10A5Q9H207 317 aa7.85□□□□□ -1.15
TOPBP1-206ENST00000508524 PRAMEF22A3QJZ6 481 aa7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 DVL2O14641 736 aa7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 ADCY8P40145 1251 aa7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 PIK3R6Q5UE93 754 aa7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 SLFN13Q68D06 897 aa7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 CC2D1AQ6P1N0 951 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 RTN4RL1Q86UN2 441 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 HOMER1Q86YM7 354 aa7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 FOXRED1Q96CU9 486 aaPredicted RBP7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 LOXL4Q96JB6 756 aa7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 FBXO10Q9UK96 956 aa7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 CD2APQ9Y5K6 639 aa7.84□□□□□ -1.15
TOPBP1-206ENST00000508524 NPEPPSL1A6NEC2 478 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 GOLGA6L22H0YM25 854 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 KRT37O76014 449 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 JMJD7P0C870 316 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 ADAM17P78536 824 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 CD83Q01151 205 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 TCEA2Q15560 299 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 TKFCQ3LXA3 575 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 JAZF1Q86VZ6 243 aa7.83□□□□□ -1.16
TOPBP1-206ENST00000508524 IFNL2Q8IZJ0 200 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms