RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 CYP2D7A0A087X1C5 515 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 A0A0A6YYK5 440 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZNF233A6NK53 670 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 ANKRD65E5RJM6 399 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 E7EVH7 732 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 PGRMC1O00264 195 aaKnown RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 C21orf2O43822 256 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 PALMO75781 387 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 FLOT1O75955 427 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 TRIM37O94972 964 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 NTSR2O95665 410 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 PAEPP09466 180 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 TSPY3P0CV98 308 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 TSPY8P0CW00 308 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 MYBP10242 640 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 GCFC2P16383 781 aaKnown RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 CTNNA1P35221 906 aaKnown RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 CARSP49589 748 aaKnown RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 KLK7P49862 253 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 ATP1A2P50993 1020 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 USP11P51784 963 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 NPEPPSP55786 919 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 MARSP56192 900 aaKnown RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 SH3BP2P78314 561 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 TFAP4Q01664 338 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 MECOMQ03112 1051 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 LMNB2Q03252 620 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 GFPT1Q06210 699 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 KLHL30Q0D2K2 578 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLMAPQ14BN4 828 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 SF3B3Q15393 1217 aaKnown RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 EZH2Q15910 746 aaKnown RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 CALCRLQ16602 461 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 KIAA0753Q2KHM9 967 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 LETM2Q2VYF4 491 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 LINC01559Q495D7 138 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 LACTB2Q53H82 288 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 ODF2Q5BJF6 829 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM83BQ5T0W9 1011 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 GKAP1Q5VSY0 366 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 FBXW10Q5XX13 1052 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 KCTD16Q68DU8 428 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 RCSD1Q6JBY9 416 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 CLEC4GQ6UXB4 293 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 KRT26Q7Z3Y9 468 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 FBXO33Q7Z6M2 555 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC65Q8IXS2 484 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 CACNA2D3Q8IZS8 1091 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 GPATCH11Q8N954 259 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 USP38Q8NB14 1042 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 KIAA0895Q8NCT3 520 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 SMCR8Q8TEV9 937 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 HDAC7Q8WUI4 952 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 CASKIN2Q8WXE0 1202 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 RAD54LQ92698 747 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 KAT2BQ92831 832 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 GPKOWQ92917 476 aaPredicted RBP eCLIP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 CENPTQ96BT3 561 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 CYFIP2Q96F07 1278 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 RNPC3Q96LT9 517 aaKnown RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 KRT12Q99456 494 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 MXD3Q9BW11 206 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 LSM14BQ9BX40 385 aaKnown RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 NSRP1Q9H0G5 558 aaKnown RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 RAB17Q9H0T7 212 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 GLT8D2Q9H1C3 349 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 TMEM60Q9H2L4 133 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 SEMA6BQ9H3T3 888 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLC39A2Q9NP94 309 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 MCM9Q9NXL9 1143 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 AIPL1Q9NZN9 384 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 MAD2L2Q9UI95 211 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 TFR2Q9UP52 801 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 DAAM1Q9Y4D1 1078 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 SAMM50Q9Y512 469 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 COL1A1P02452 1464 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 TOGARAM1Q9Y4F4 1720 aa5.43□□□□□ -1.54
HMGB3P16-201ENST00000508037 MAST2Q6P0Q8 1798 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 CICQ96RK0 1608 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 GOLGA6L10A0A0M3HER8 536 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 A0A1B0GUA9 196 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 PALM3A6NDB9 673 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 SMCO2A6NFE2 343 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 C5orf60A6NFR6 353 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 CFAP73A6NFT4 308 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 PP2D1A8MPX8 630 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 KLRF2D3W0D1 207 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 TRAF5O00463 557 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 CETN3O15182 167 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 SART1O43290 800 aaKnown RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 TRAPPC3O43617 180 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 NCK2O43639 380 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 BUB1O43683 1085 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 MARCH6O60337 910 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 KIF4AO95239 1232 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 F12P00748 615 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 AVPP01185 164 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 KRT14P02533 472 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 GLI1P08151 1106 aa5.42□□□□□ -1.54
HMGB3P16-201ENST00000508037 GSTA1P08263 222 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms