RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 STAT6P42226 847 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 CPT1AP50416 773 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 STAT5BP51692 787 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 PRKCEQ02156 737 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 MLLT1Q03111 559 aaPredicted RBP15.87■□□□□ 0.13
RNF4-208ENST00000507247 DGKDQ16760 1214 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 LONRF3Q496Y0 759 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 FAM160B1Q5W0V3 765 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 PDXDC2PQ6P474 469 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 C4orf19Q8IY42 314 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 KLHDC9Q8NEP7 349 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 PIGOQ8TEQ8 1089 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 ATP6V0A1Q93050 837 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 DACT1Q9NYF0 836 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 TMEM150BA6NC51 233 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 MBD3O95983 291 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 MYL3P08590 195 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 MARK3P27448 753 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 CST5P28325 142 aaPredicted RBP15.86■□□□□ 0.13
RNF4-208ENST00000507247 CCSAPQ6IQ19 270 aaPredicted RBP15.86■□□□□ 0.13
RNF4-208ENST00000507247 PLPPR4Q7Z2D5 763 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 TRMT1LQ7Z2T5 733 aaKnown RBP15.86■□□□□ 0.13
RNF4-208ENST00000507247 RAD54LQ92698 747 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 GLG1Q92896 1179 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 RNF208Q9H0X6 261 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 SMARCAD1Q9H4L7 1026 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 AZI2Q9H6S1 392 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 SPC25Q9HBM1 224 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 STK17AQ9UEE5 414 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 HTTP42858 3142 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 SCN10AQ9Y5Y9 1956 aa15.86■□□□□ 0.13
RNF4-208ENST00000507247 YWHABP31946 246 aaKnown RBP15.85■□□□□ 0.13
RNF4-208ENST00000507247 MCM6Q14566 821 aa15.85■□□□□ 0.13
RNF4-208ENST00000507247 PLCB4Q15147 1175 aa15.85■□□□□ 0.13
RNF4-208ENST00000507247 LRRC41Q15345 812 aa15.85■□□□□ 0.13
RNF4-208ENST00000507247 GNASQ5JWF2 1037 aa15.85■□□□□ 0.13
RNF4-208ENST00000507247 PLA2G4FQ68DD2 849 aa15.85■□□□□ 0.13
RNF4-208ENST00000507247 KRBA2Q6ZNG9 492 aa15.85■□□□□ 0.13
RNF4-208ENST00000507247 ANO5Q75V66 913 aa15.85■□□□□ 0.13
RNF4-208ENST00000507247 IQUBQ8NA54 791 aa15.85■□□□□ 0.13
RNF4-208ENST00000507247 LARP4BQ92615 738 aaKnown RBP15.85■□□□□ 0.13
RNF4-208ENST00000507247 KAT2BQ92831 832 aa15.85■□□□□ 0.13
RNF4-208ENST00000507247 DEFB118Q96PH6 123 aa15.85■□□□□ 0.13
RNF4-208ENST00000507247 PYM1Q9BRP8 204 aaKnown RBP15.85■□□□□ 0.13
RNF4-208ENST00000507247 DKC1O60832 514 aaKnown RBP eCLIP15.84■□□□□ 0.13
RNF4-208ENST00000507247 EYA4O95677 639 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 F2P00734 622 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 OATP04181 439 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 SLFN14P0C7P3 912 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 PURAQ00577 322 aaKnown RBP15.84■□□□□ 0.13
RNF4-208ENST00000507247 BRDTQ58F21 947 aaPredicted RBP15.84■□□□□ 0.13
RNF4-208ENST00000507247 XKR3Q5GH77 459 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 CKAP2LQ8IYA6 745 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 GRAMD1CQ8IYS0 662 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 CNNM3Q8NE01 707 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 STAMQ92783 540 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 TIGD1Q96MW7 591 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 NACC1Q96RE7 527 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 MTRQ99707 1265 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 SH2D3AQ9BRG2 576 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 BHMT2Q9H2M3 363 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 CUEDC2Q9H467 287 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 RNPEPQ9H4A4 650 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 ERAP1Q9NZ08 941 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 USP25Q9UHP3 1055 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 DNM3Q9UQ16 869 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 KAT6AQ92794 2004 aa15.84■□□□□ 0.13
RNF4-208ENST00000507247 H3BRB1 525 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 HAS3O00219 553 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 KINO60870 393 aaKnown RBP15.83■□□□□ 0.12
RNF4-208ENST00000507247 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
RNF4-208ENST00000507247 PLA2G4BP0C869 781 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 SLC26A2P50443 739 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 SLC12A3P55017 1021 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 DHX8Q14562 1220 aaKnown RBP15.83■□□□□ 0.12
RNF4-208ENST00000507247 KCNA10Q16322 511 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 KLHL40Q2TBA0 621 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 CEP57L1Q8IYX8 460 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 KCTD17Q8N5Z5 321 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 ATP8B4Q8TF62 1192 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 TUT1Q9H6E5 874 aaKnown RBP15.83■□□□□ 0.12
RNF4-208ENST00000507247 ANKEF1Q9NU02 776 aa15.83■□□□□ 0.12
RNF4-208ENST00000507247 SEPT9Q9UHD8 586 aaPredicted RBP15.83■□□□□ 0.12
RNF4-208ENST00000507247 DBR1Q9UK59 544 aaKnown RBP15.83■□□□□ 0.12
RNF4-208ENST00000507247 ZNF215Q9UL58 517 aaPredicted RBP15.83■□□□□ 0.12
RNF4-208ENST00000507247 TNRC18O15417 2968 aaPredicted RBP15.82■□□□□ 0.12
RNF4-208ENST00000507247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.82■□□□□ 0.12
RNF4-208ENST00000507247 TRAK2O60296 914 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 KPNA6O60684 536 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 SSBP05455 408 aaKnown RBP eCLIP15.82■□□□□ 0.12
RNF4-208ENST00000507247 ASGR1P07306 291 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 PRR29P0C7W0 189 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 XRCC6P12956 609 aaKnown RBP eCLIP15.82■□□□□ 0.12
RNF4-208ENST00000507247 AFMP43652 599 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 RARRES1P49788 294 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 PSEN2P49810 448 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 NPEPPSP55786 919 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 MFSD10Q14728 455 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 CXCL17Q6UXB2 119 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 SH3RF1Q7Z6J0 888 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms