RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SAMM50Q9Y512 469 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 MKI67P46013 3256 aaKnown RBP9.48□□□□□ -0.89
PDGFC-205ENST00000506880 A0A1W2PPC1 479 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 C17orf102A2RUQ5 167 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 ADAMTS3O15072 1205 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 ASAP2O43150 1006 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 EFCAB14O75071 495 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 CCNE2O96020 404 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 OATP04181 439 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 CLTBP09497 229 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 ATXN8OSP0DMR3 200 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 MLLT1Q03111 559 aaPredicted RBP9.48□□□□□ -0.89
PDGFC-205ENST00000506880 POU5F1BQ06416 359 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 NBPF20Q3BBV1 942 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 SERINC5Q86VE9 423 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
PDGFC-205ENST00000506880 LINC00301Q8NCQ3 95 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 KCNN1Q92952 543 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 VTI1AQ96AJ9 217 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 LRRC27Q9C0I9 530 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 C17orf75Q9HAS0 396 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 CHMP5Q9NZZ3 219 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 PCDH10Q9P2E7 1040 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 LRWD1Q9UFC0 647 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 USP25Q9UHP3 1055 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 PCDHB6Q9Y5E3 794 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 PCDHA2Q9Y5H9 948 aa9.48□□□□□ -0.89
PDGFC-205ENST00000506880 ARID2Q68CP9 1835 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 TANC1Q9C0D5 1861 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 SMIM35A0A1B0GVV1 85 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 MYADML2A6NDP7 307 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 HAX1O00165 279 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 EVI5O60447 810 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 DGAT1O75907 488 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 SMIM10L2AP0DMW4 78 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 SMIM10L2BP0DMW5 78 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 TXKP42681 527 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 DNM2P50570 870 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 RTP1P59025 263 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 BEX3Q00994 111 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 PPFIA1Q13136 1202 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 PTPAQ15257 358 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 SF3A1Q15459 793 aaKnown RBP9.47□□□□□ -0.89
PDGFC-205ENST00000506880 TARBP2Q15633 366 aaKnown RBP9.47□□□□□ -0.89
PDGFC-205ENST00000506880 ZNF174Q15697 407 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 SWSAP1Q6NVH7 229 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 CLEC17AQ6ZS10 378 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 CCDC60Q8IWA6 550 aaPredicted RBP9.47□□□□□ -0.89
PDGFC-205ENST00000506880 SLC17A8Q8NDX2 589 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 MCPH1Q8NEM0 835 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 TCP11Q8WWU5 503 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 CALML4Q96GE6 196 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 IPO9Q96P70 1041 aaKnown RBP9.47□□□□□ -0.89
PDGFC-205ENST00000506880 PCYT2Q99447 389 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 EIF2AK1Q9BQI3 630 aaKnown RBP9.47□□□□□ -0.89
PDGFC-205ENST00000506880 TMEM60Q9H2L4 133 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 STK17AQ9UEE5 414 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 CCDC39Q9UFE4 941 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 RCOR1Q9UKL0 485 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 NOD1Q9Y239 953 aa9.47□□□□□ -0.89
PDGFC-205ENST00000506880 MYH11P35749 1972 aa9.46□□□□□ -0.89
PDGFC-205ENST00000506880 FAM205CA6NFA0 338 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 SPTLC2O15270 562 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 CUTAO60888 179 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 SLITRK3O94933 977 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 MYL1P05976 194 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 UBA7P41226 1012 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 SOX10P56693 466 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 PRKCEQ02156 737 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 MXD4Q14582 209 aaPredicted RBP9.46□□□□□ -0.9
PDGFC-205ENST00000506880 PLCB4Q15147 1175 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 STK38Q15208 465 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 GRIK4Q16099 956 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 FAM26DQ5JW98 314 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 IER5Q5VY09 327 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 CCDC73Q6ZRK6 1079 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 RPUSD2Q8IZ73 545 aaKnown RBP9.46□□□□□ -0.9
PDGFC-205ENST00000506880 SLC7A3Q8WY07 619 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 LENG1Q96BZ8 264 aaPredicted RBP9.46□□□□□ -0.9
PDGFC-205ENST00000506880 LXNQ9BS40 222 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 INO80BQ9C086 356 aaPredicted RBP9.46□□□□□ -0.9
PDGFC-205ENST00000506880 GABBR1Q9UBS5 961 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 TUBE1Q9UJT0 475 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 TBX21Q9UL17 535 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 DNM3Q9UQ16 869 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 GRIN2DO15399 1336 aa9.46□□□□□ -0.9
PDGFC-205ENST00000506880 IGKV6-21A0A0C4DH24 114 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 M0QZ92 97 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 TIMP1P01033 207 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 ZNF286BP0CG31 522 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 YWHABP31946 246 aaKnown RBP9.45□□□□□ -0.9
PDGFC-205ENST00000506880 BMP8BP34820 402 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 TECP42680 631 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 FOSBP53539 338 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 TLE2Q04725 743 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 TBC1D8BQ0IIM8 1120 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 PPIGQ13427 754 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDGFC-205ENST00000506880 PTGISQ16647 500 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 LRRC26Q2I0M4 334 aa9.45□□□□□ -0.9
PDGFC-205ENST00000506880 UTP14CQ5TAP6 766 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms