RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 KBTBD13C9JR72 458 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 H3BRB1 525 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 GADD45BO75293 160 aaPredicted RBP9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 LGR5O75473 907 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 STBD1O95210 358 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 YEATS4O95619 227 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 PSAPP07602 524 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 SPATA31C1P0DKV0 1188 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 HOXD8P13378 290 aaPredicted RBP9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 PSEN2P49810 448 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 IGBP1P78318 339 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 ORC2Q13416 577 aaPredicted RBP9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 EPHA7Q15375 998 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 KIAA0753Q2KHM9 967 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 NBPF20Q3BBV1 942 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 FAM47CQ5HY64 1035 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 AXDND1Q5T1B0 1012 aaPredicted RBP9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 PLA2G4FQ68DD2 849 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 POTEBQ6S5H4 581 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 KCNK18Q7Z418 384 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 CATSPER3Q86XQ3 398 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 IGSF22Q8N9C0 903 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 KRI1Q8N9T8 703 aaKnown RBP9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 PIGOQ8TEQ8 1089 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 PNMA5Q96PV4 448 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 MTG1Q9BT17 334 aaPredicted RBP9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 TUT1Q9H6E5 874 aaKnown RBP9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 CFAP45Q9UL16 551 aa9.92□□□□□ -0.82
SCAMP1-202ENST00000506858 A0A087X0B3 334 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 IGKV6D-21A0A0A0MT36 114 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 DDX11L8A8MPP1 907 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 DNM1LO00429 736 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 CST5P28325 142 aaPredicted RBP9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 CCT6AP40227 531 aaKnown RBP9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 PRPHP41219 470 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 JAK3P52333 1124 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 NPEPPSP55786 919 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 NKX3-2P78367 333 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 MFSD10Q14728 455 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 KARSQ15046 597 aaKnown RBP9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 PLCB4Q15147 1175 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 TMEM266Q2M3C6 531 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 BRDTQ58F21 947 aaPredicted RBP9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 ARL6IP4Q66PJ3 421 aaKnown RBP9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 SHC4Q6S5L8 630 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 CKAP2LQ8IYA6 745 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 ZNF710Q8N1W2 664 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 PCSK9Q8NBP7 692 aaKnown RBP9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 SNX29Q8TEQ0 813 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 HSD17B14Q9BPX1 270 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 LXNQ9BS40 222 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 AZI2Q9H6S1 392 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 SETD4Q9NVD3 440 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 HDAC6Q9UBN7 1215 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 PHF24Q9UPV7 400 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 ATP6V1DQ9Y5K8 247 aa9.91□□□□□ -0.82
SCAMP1-202ENST00000506858 CEP290O15078 2479 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 LAD1O00515 517 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 ZEB2O60315 1214 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 BMP15O95972 392 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 F2P00734 622 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 P4HBP07237 508 aaKnown RBP9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 SFNP31947 248 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 QARSP47897 775 aaKnown RBP9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 PRKCEQ02156 737 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 GRB10Q13322 594 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 DHX8Q14562 1220 aaKnown RBP9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 CABP7Q86V35 215 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 SMAP1Q8IYB5 467 aaPredicted RBP9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 PDILTQ8N807 584 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 TRPV6Q9H1D0 765 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 SMARCAD1Q9H4L7 1026 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 STARD7Q9NQZ5 370 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 KIAA1024Q9UPX6 916 aa9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 MAFBQ9Y5Q3 323 aaPredicted RBP9.9□□□□□ -0.82
SCAMP1-202ENST00000506858 MYH15Q9Y2K3 1946 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 FRMPD3Q5JV73 1810 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 A0A1B0GVL5 298 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 E9PMD0 336 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 HAS3O00219 553 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 PPP6R2O75170 966 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 COL6A1P12109 1028 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 INSRRP14616 1297 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 UBA7P41226 1012 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 ITGA7Q13683 1181 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 PDIA5Q14554 519 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 LRRC26Q2I0M4 334 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 MTERF2Q49AM1 385 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 FAM160B1Q5W0V3 765 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 ATL3Q6DD88 541 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 GDF6Q6KF10 455 aaPredicted RBP9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 ANO5Q75V66 913 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 FBXO22Q8NEZ5 403 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 KCNG4Q8TDN1 519 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 GLT1D1Q96MS3 346 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 TSEN34Q9BSV6 310 aaKnown RBP9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 TRMT13Q9NUP7 481 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms