RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.56■□□□□ 0.882e-21■■■□□ 17.2
PDLIM7-216ENST00000506537 TUBE1Q9UJT0 475 aa20.56■□□□□ 0.88
PDLIM7-216ENST00000506537 H3BQV1 296 aa20.55■□□□□ 0.88
PDLIM7-216ENST00000506537 ZNF174Q15697 407 aa20.55■□□□□ 0.88
PDLIM7-216ENST00000506537 TTC38Q5R3I4 469 aa20.55■□□□□ 0.88
PDLIM7-216ENST00000506537 TMEM240Q5SV17 173 aa20.55■□□□□ 0.88
PDLIM7-216ENST00000506537 ZNF618Q5T7W0 954 aa20.55■□□□□ 0.88
PDLIM7-216ENST00000506537 MCTP1Q6DN14 999 aa20.55■□□□□ 0.88
PDLIM7-216ENST00000506537 LRRC8DQ7L1W4 858 aa20.55■□□□□ 0.88
PDLIM7-216ENST00000506537 SLFN12Q8IYM2 578 aa20.55■□□□□ 0.88
PDLIM7-216ENST00000506537 RETREG2Q8NC44 543 aa20.55■□□□□ 0.88
PDLIM7-216ENST00000506537 FOXD4L1Q9NU39 408 aa20.55■□□□□ 0.88
PDLIM7-216ENST00000506537 RRN3P2A6NIE6 340 aa20.54■□□□□ 0.88
PDLIM7-216ENST00000506537 HBP1O60381 514 aa20.54■□□□□ 0.88
PDLIM7-216ENST00000506537 THPOP40225 353 aa20.54■□□□□ 0.88
PDLIM7-216ENST00000506537 TRAPPC10P48553 1259 aa20.54■□□□□ 0.88
PDLIM7-216ENST00000506537 PRKCEQ02156 737 aa20.54■□□□□ 0.88
PDLIM7-216ENST00000506537 MBTPS1Q14703 1052 aa20.54■□□□□ 0.88
PDLIM7-216ENST00000506537 CKAP2LQ8IYA6 745 aa20.54■□□□□ 0.88
PDLIM7-216ENST00000506537 SIP14410 1827 aa20.54■□□□□ 0.88
PDLIM7-216ENST00000506537 TET1Q8NFU7 2136 aa20.54■□□□□ 0.88
PDLIM7-216ENST00000506537 MARCH6O60337 910 aa20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 BAG4O95429 457 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 OATP04181 439 aa20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 ORC2Q13416 577 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 NCAPH2Q6IBW4 605 aa20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 ZNF365Q70YC5 407 aa20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 TRMT1LQ7Z2T5 733 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 DEFB128Q7Z7B8 93 aa20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 HSCBQ8IWL3 235 aa20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 BANK1Q8NDB2 785 aa20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 BBXQ8WY36 941 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 NOL7Q9UMY1 257 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 PCDHB6Q9Y5E3 794 aa20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 COL1A2P08123 1366 aa20.53■□□□□ 0.88
PDLIM7-216ENST00000506537 SOX1O00570 391 aaPredicted RBP20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 NBNO60934 754 aa20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 STBD1O95210 358 aa20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 CTSHP09668 335 aa20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 RFC2P35250 354 aa20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 TAF2Q6P1X5 1199 aa20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 PSRC1Q6PGN9 363 aaPredicted RBP20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 MTHFD1LQ6UB35 978 aa20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 C4orf32Q8N8J7 132 aa20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 FAM167AQ96KS9 214 aa20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 OSBPL7Q9BZF2 842 aa20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 TTC12Q9H892 705 aaPredicted RBP20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 WRAP73Q9P2S5 460 aaPredicted RBP20.52■□□□□ 0.88
PDLIM7-216ENST00000506537 TMEM150BA6NC51 233 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 CAND2O75155 1236 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 C22orf31O95567 290 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 OR52Z1P0C646 297 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 TXKP42681 527 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 ZNF484Q5JVG2 852 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 RASIP1Q5U651 963 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 RPAINQ86UA6 219 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 DNAJB3Q8WWF6 145 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 TNPO1Q92973 898 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 RNPC3Q96LT9 517 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 PCDHA12Q9UN75 941 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 PCDHA2Q9Y5H9 948 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 SZT2Q5T011 3432 aa20.51■□□□□ 0.87
PDLIM7-216ENST00000506537 VPS37CA5D8V6 355 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 POTEMA6NI47 508 aa20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 RSPH10B2B2RC85 870 aa20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 CXCL10P02778 98 aa20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 RSPH10BP0C881 870 aa20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 SYT1P21579 422 aa20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 KLRC1P26715 233 aa20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 EPHA7Q15375 998 aa20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 TCTN1Q2MV58 587 aa20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 LRIT3Q3SXY7 679 aa20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 RPUSD2Q8IZ73 545 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 FAM49AQ9H0Q0 323 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 RGL1Q9NZL6 768 aa20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 CXXC1Q9P0U4 656 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-216ENST00000506537 FGBP02675 491 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 CHRNA1P02708 482 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 PFKMP08237 780 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 PDCP20941 246 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 QARSP47897 775 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 PSMC5P62195 406 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 MGAT3Q09327 533 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 FAM26DQ5JW98 314 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 OTOP2Q7RTS6 562 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 HERVK_113Q902F9 699 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 DYDC2Q96IM9 177 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 LXNQ9BS40 222 aa20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-216ENST00000506537 SMIM35A0A1B0GVV1 85 aa20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 P4HBP07237 508 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 CYP4A11Q02928 519 aa20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 TARBP2Q15633 366 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 RILPL1Q5EBL4 403 aa20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 XKR3Q5GH77 459 aa20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 ANO5Q75V66 913 aa20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 FERMT3Q86UX7 667 aa20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 CEP89Q96ST8 783 aa20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 EIF2AK1Q9BQI3 630 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 SH2D3AQ9BRG2 576 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms