RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TFF2Q03403 129 aa19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 SSRP1Q08945 709 aaKnown RBP19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 TMEM62Q0P6H9 643 aa19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 PRR16Q569H4 304 aa19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 RPAINQ86UA6 219 aa19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 LINC01599Q8WXQ3 324 aa19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 LRFN3Q9BTN0 628 aa19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 FAM49AQ9H0Q0 323 aaPredicted RBP19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 AGO3Q9H9G7 860 aaKnown RBP19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 KCNJ14Q9UNX9 436 aa19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 CDY2AQ9Y6F7 541 aa19.02■□□□□ 0.64
PDLIM7-215ENST00000506161 LINC01553A4QN01 128 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 MSH4O15457 936 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 CAND2O75155 1236 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 TDP2O95551 362 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 GNA11P29992 359 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 NLRP5P59047 1200 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 ST3GAL1Q11201 340 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 PLPPR4Q7Z2D5 763 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 MYOCDQ8IZQ8 938 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 MICALL1Q8N3F8 863 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 CCDC148Q8NFR7 591 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 CCDC12Q8WUD4 166 aaPredicted RBP19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 IL17RAQ96F46 866 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 ZNF577Q9BSK1 485 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 SH3GLB2Q9NR46 395 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 MTUS1Q9ULD2 1270 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 TRPC6Q9Y210 931 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 MTCH2Q9Y6C9 303 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 TRANK1O15050 2925 aa19.01■□□□□ 0.63
PDLIM7-215ENST00000506161 DEXIO95424 95 aa19■□□□□ 0.63
PDLIM7-215ENST00000506161 HTRA4P83105 476 aaPredicted RBP19■□□□□ 0.63
PDLIM7-215ENST00000506161 GRB10Q13322 594 aa19■□□□□ 0.63
PDLIM7-215ENST00000506161 FBXO47Q5MNV8 452 aa19■□□□□ 0.63
PDLIM7-215ENST00000506161 SWSAP1Q6NVH7 229 aa19■□□□□ 0.63
PDLIM7-215ENST00000506161 TBCKQ8TEA7 893 aa19■□□□□ 0.63
PDLIM7-215ENST00000506161 GDPD5Q8WTR4 605 aa19■□□□□ 0.63
PDLIM7-215ENST00000506161 IFIH1Q9BYX4 1025 aaKnown RBP19■□□□□ 0.63
PDLIM7-215ENST00000506161 AZI2Q9H6S1 392 aa19■□□□□ 0.63
PDLIM7-215ENST00000506161 CDHR5Q9HBB8 845 aa19■□□□□ 0.63
PDLIM7-215ENST00000506161 PCDHA4Q9UN74 947 aa19■□□□□ 0.63
PDLIM7-215ENST00000506161 POTEB3A0JP26 581 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 PFKFB2O60825 505 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 KCNQ1P51787 676 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 MRPS6P82932 125 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 SKIV2LQ15477 1246 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 UGCGQ16739 394 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 ME3Q16798 604 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 TMEM31Q5JXX7 168 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 TAF2Q6P1X5 1199 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 POTEBQ6S5H4 581 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 MTHFD1LQ6UB35 978 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 TRMT1LQ7Z2T5 733 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 RTN4RL1Q86UN2 441 aaPredicted RBP18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 BLIDQ8IZY5 108 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 NECAB1Q8N987 351 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 OXER1Q8TDS5 423 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 SEPT8Q92599 483 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 RAD9AQ99638 391 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 C17orf80Q9BSJ5 609 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 ZBED2Q9BTP6 218 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 EPHX3Q9H6B9 360 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 ZNF302Q9NR11 478 aa18.99■□□□□ 0.63
PDLIM7-215ENST00000506161 FAM205CA6NFA0 338 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 KIF28PB7ZC32 967 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 BACH1O14867 736 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 ZNF862O60290 1169 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 UPP2O95045 317 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 FDPSP14324 419 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 CD52P31358 61 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 EARS2Q5JPH6 523 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 TRIM22Q8IYM9 498 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 DAGLBQ8NCG7 672 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 SP7Q8TDD2 431 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 ATP8B4Q8TF62 1192 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 TOP1MTQ969P6 601 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 SUGCTQ9HAC7 445 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 PCDHA2Q9Y5H9 948 aa18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 FNDC1Q4ZHG4 1894 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-215ENST00000506161 RRN3P2A6NIE6 340 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 CPLX1O14810 134 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 EFCAB14O75071 495 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 LINC00271P0C7V0 271 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 KLRC1P26715 233 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 SETQ01105 290 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 ZNF746Q6NUN9 644 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 PDXDC2PQ6P474 469 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 BICD2Q8TD16 824 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 TMEM40Q8WWA1 233 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 SLC5A5Q92911 643 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 PPP1R16BQ96T49 567 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 PHF20Q9BVI0 1012 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 UNC45AQ9H3U1 944 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 MAFBQ9Y5Q3 323 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 ARID2Q68CP9 1835 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 IGSF9BQ9UPX0 1349 aa18.97■□□□□ 0.63
PDLIM7-215ENST00000506161 SLC37A4O43826 429 aa18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 AMHP03971 560 aa18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 POU3F3P20264 500 aaPredicted RBP18.96■□□□□ 0.63
PDLIM7-215ENST00000506161 ANAPC15P60006 121 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms