RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 DTX3Q8N9I9 347 aa7.94□□□□□ -1.14
NIPBL-205ENST00000505998 SMC1BQ8NDV3 1235 aa7.94□□□□□ -1.14
NIPBL-205ENST00000505998 IGDCC4Q8TDY8 1250 aa7.94□□□□□ -1.14
NIPBL-205ENST00000505998 GBP4Q96PP9 640 aa7.94□□□□□ -1.14
NIPBL-205ENST00000505998 DNMBPQ6XZF7 1577 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 DBX1A6NMT0 343 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 SLC9A1P19634 815 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 PTGS1P23219 599 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 CAP1Q01518 475 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 STRN3Q13033 797 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 CATSPEREQ5SY80 951 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 CREB3L3Q68CJ9 461 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 TTLL7Q6ZT98 887 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 SAPCD2Q86UD0 394 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 PASD1Q8IV76 773 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 EFHBQ8N7U6 833 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 HIPK4Q8NE63 616 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 ASB15Q8WXK1 588 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 H2AFY2Q9P0M6 372 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-205ENST00000505998 ARHGAP20Q9P2F6 1191 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 CROTQ9UKG9 612 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 SPO11Q9Y5K1 396 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 MRC2Q9UBG0 1479 aa7.93□□□□□ -1.14
NIPBL-205ENST00000505998 TOP2BQ02880 1626 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 RASSF10A6NK89 507 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 CYP7B1O75881 506 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 FKBP9O95302 570 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 CYP17A1P05093 508 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 THBS2P35442 1172 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 GLRBP48167 497 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 FNTBP49356 437 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 TCERG1LQ5VWI1 586 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 FKBP9P1Q75LS8 142 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 STRA8Q7Z7C7 330 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 C11orf74Q86VG3 221 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 LRRC56Q8IYG6 542 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-205ENST00000505998 ERCC4Q92889 916 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-205ENST00000505998 ELF4Q99607 663 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-205ENST00000505998 TTC1Q99614 292 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 SPATA6Q9NWH7 488 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-205ENST00000505998 BTBD7Q9P203 1132 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 ASB1Q9Y576 335 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 ABCC8Q09428 1581 aa7.92□□□□□ -1.14
NIPBL-205ENST00000505998 PRAMEF22A3QJZ6 481 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 FBXO21O94952 628 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 CPEP16870 476 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 MC4RP32245 332 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 ADCYAP1R1P41586 468 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 LSSP48449 732 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 NFKB2Q00653 900 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 VWA3BQ502W6 1294 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 PHF19Q5T6S3 580 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 PRAMEF18Q5VWM3 479 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 CILP2Q8IUL8 1156 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 ZSCAN18Q8TBC5 510 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-205ENST00000505998 ZNF526Q8TF50 670 aaPredicted RBP7.91□□□□□ -1.14
NIPBL-205ENST00000505998 IFT22Q9H7X7 185 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 INCENPQ9NQS7 918 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 TOMM22Q9NS69 142 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 SPTLC3Q9NUV7 552 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 UCKL1Q9NWZ5 548 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 NTMQ9P121 344 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 ZFP69BQ9UJL9 534 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 URB2Q14146 1524 aaKnown RBP7.91□□□□□ -1.14
NIPBL-205ENST00000505998 WDR97A6NE52 1622 aa7.91□□□□□ -1.14
NIPBL-205ENST00000505998 ANKRD62A6NC57 917 aa7.9□□□□□ -1.14
NIPBL-205ENST00000505998 PTX3P26022 381 aaPredicted RBP7.9□□□□□ -1.14
NIPBL-205ENST00000505998 VMACQ2NL98 169 aa7.9□□□□□ -1.14
NIPBL-205ENST00000505998 AFAP1L2Q8N4X5 818 aa7.9□□□□□ -1.14
NIPBL-205ENST00000505998 SCYL1Q96KG9 808 aa7.9□□□□□ -1.14
NIPBL-205ENST00000505998 CUX1P39880 1505 aa7.89□□□□□ -1.15
NIPBL-205ENST00000505998 SH3D21A4FU49 640 aa7.89□□□□□ -1.15
NIPBL-205ENST00000505998 FFAR3O14843 346 aa7.89□□□□□ -1.15
NIPBL-205ENST00000505998 ZEB2O60315 1214 aa7.89□□□□□ -1.15
NIPBL-205ENST00000505998 BPIP17213 487 aa7.89□□□□□ -1.15
NIPBL-205ENST00000505998 RPL13P26373 211 aaKnown RBP7.89□□□□□ -1.15
NIPBL-205ENST00000505998 CFPP27918 469 aa7.89□□□□□ -1.15
NIPBL-205ENST00000505998 DLX2Q07687 328 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-205ENST00000505998 RTP5Q14D33 572 aa7.89□□□□□ -1.15
NIPBL-205ENST00000505998 LINC01356Q8N9X3 169 aa7.89□□□□□ -1.15
NIPBL-205ENST00000505998 E2F7Q96AV8 911 aa7.89□□□□□ -1.15
NIPBL-205ENST00000505998 TACO1Q9BSH4 297 aaKnown RBP7.89□□□□□ -1.15
NIPBL-205ENST00000505998 GALNT8Q9NY28 637 aa7.89□□□□□ -1.15
NIPBL-205ENST00000505998 SYNJ1O43426 1573 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 TOPBP1Q92547 1522 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 CUX2O14529 1486 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 ADAMTS20P59510 1910 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 GOLGA6L22H0YM25 854 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 NEMP1O14524 444 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 BRINP1O60477 761 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 SARSP49591 514 aaKnown RBP7.88□□□□□ -1.15
NIPBL-205ENST00000505998 EPHA7Q15375 998 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 SMAD2Q15796 467 aaKnown RBP7.88□□□□□ -1.15
NIPBL-205ENST00000505998 ATP13A4Q4VNC1 1196 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 PRR31Q5SQ13 230 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 DPP8Q6V1X1 898 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-205ENST00000505998 NME9Q86XW9 330 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 ZZZ3Q8IYH5 903 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 ADGRG2Q8IZP9 1017 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 STPG3Q8N7X2 389 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms