RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 ARHGAP44Q17R89 818 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 MKL1Q969V6 931 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 RUSC1Q9BVN2 902 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 NUCKS1Q9H1E3 243 aaKnown RBP10.66□□□□□ -0.7
CSF1R-203ENST00000504875 HERC5Q9UII4 1024 aaKnown RBP10.66□□□□□ -0.7
CSF1R-203ENST00000504875 FAM184BQ9ULE4 1060 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 PACSIN2Q9UNF0 486 aaPredicted RBP10.66□□□□□ -0.7
CSF1R-203ENST00000504875 ATF5Q9Y2D1 282 aaPredicted RBP10.66□□□□□ -0.7
CSF1R-203ENST00000504875 SIK3Q9Y2K2 1263 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 A0A1W2PQJ5 194 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 ZBTB39O15060 712 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 SORBS3O60504 671 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 NR3C1P04150 777 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 SERPING1P05155 500 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 PRPF4BQ13523 1007 aaKnown RBP10.66□□□□□ -0.7
CSF1R-203ENST00000504875 ZC2HC1CQ53FD0 456 aaPredicted RBP10.66□□□□□ -0.7
CSF1R-203ENST00000504875 C8orf74Q6P047 294 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 RSBN1LQ6PCB5 846 aaPredicted RBP10.66□□□□□ -0.7
CSF1R-203ENST00000504875 TRAPPC11Q7Z392 1133 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 MIER3Q7Z3K6 550 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 PACS2Q86VP3 889 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 DNAAF5Q86Y56 855 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 ADAM21Q9UKJ8 722 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 BCS1LQ9Y276 419 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 EML1O00423 815 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 EDIL3O43854 480 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 ZRANB2O95218 330 aaKnown RBP eCLIP10.66□□□□□ -0.7
CSF1R-203ENST00000504875 SREBF1P36956 1147 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 GIT2Q14161 759 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 GBP6Q6ZN66 633 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 SND1Q7KZF4 910 aaKnown RBP eCLIP10.66□□□□□ -0.7
CSF1R-203ENST00000504875 HOOK2Q96ED9 719 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 GMCL1Q96IK5 515 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 TEKT3Q9BXF9 490 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 KCNMB3Q9NPA1 279 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 GCNT4Q9P109 453 aa10.66□□□□□ -0.7
CSF1R-203ENST00000504875 DDX60LQ5H9U9 1706 aaKnown RBP10.66□□□□□ -0.7
CSF1R-203ENST00000504875 RASSF10A6NK89 507 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 ATP8B1O43520 1251 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 FLOT1O75955 427 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 TUBBP07437 444 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 IVLP07476 585 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 ACTN2P35609 894 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 NOVP48745 357 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 HLTFQ14527 1009 aaKnown RBP eCLIP10.65□□□□□ -0.7
CSF1R-203ENST00000504875 SLC15A2Q16348 729 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 DNAJC21Q5F1R6 531 aaKnown RBP10.65□□□□□ -0.7
CSF1R-203ENST00000504875 MUM1L1Q5H9M0 696 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 LDHDQ86WU2 507 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 CDAN1Q8IWY9 1227 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 FAM186BQ8IYM0 893 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 FUT8Q9BYC5 575 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 TTYH3Q9C0H2 523 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 CENPHQ9H3R5 247 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 PCIF1Q9H4Z3 704 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 SPDYE2BA6NHP3 402 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 YDJCA8MPS7 323 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 SPDYE6P0CI01 402 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 KRT13P13646 458 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 TCP1P17987 556 aaKnown RBP10.65□□□□□ -0.7
CSF1R-203ENST00000504875 CASP4P49662 377 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 RRP1BQ14684 758 aaKnown RBP10.65□□□□□ -0.7
CSF1R-203ENST00000504875 FIGNQ5HY92 759 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 TATDN1Q6P1N9 297 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 SIAH1Q8IUQ4 282 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 KLHL7Q8IXQ5 586 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 GMCL1P1Q8NEA9 526 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 COG1Q8WTW3 980 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 U2AF1L4Q8WU68 220 aaKnown RBP10.65□□□□□ -0.7
CSF1R-203ENST00000504875 CXorf56Q9H5V9 222 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 BCAS3Q9H6U6 928 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 PARVGQ9HBI0 331 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 DLEC1Q9Y238 1755 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 TAF1LQ8IZX4 1826 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 K7ENM7 598 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 ZNF263O14978 683 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 PALMO75781 387 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 GFPT2O94808 682 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 EIF2AK2P19525 551 aaKnown RBP10.65□□□□□ -0.7
CSF1R-203ENST00000504875 ABCB4P21439 1286 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 FECHP22830 423 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 USP14P54578 494 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 KCNA1Q09470 495 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 SYT2Q8N9I0 419 aaPredicted RBP10.65□□□□□ -0.7
CSF1R-203ENST00000504875 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 FAN1Q9Y2M0 1017 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 STK24Q9Y6E0 443 aa10.65□□□□□ -0.7
CSF1R-203ENST00000504875 TESPA1A2RU30 521 aaPredicted RBP10.64□□□□□ -0.71
CSF1R-203ENST00000504875 EYA4O95677 639 aa10.64□□□□□ -0.71
CSF1R-203ENST00000504875 SLC12A3P55017 1021 aa10.64□□□□□ -0.71
CSF1R-203ENST00000504875 KCNMA1Q12791 1236 aa10.64□□□□□ -0.71
CSF1R-203ENST00000504875 CEP55Q53EZ4 464 aa10.64□□□□□ -0.71
CSF1R-203ENST00000504875 ARSHQ5FYA8 562 aa10.64□□□□□ -0.71
CSF1R-203ENST00000504875 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
CSF1R-203ENST00000504875 FAM151AQ8WW52 585 aa10.64□□□□□ -0.71
CSF1R-203ENST00000504875 PPM1EQ8WY54 764 aa10.64□□□□□ -0.71
CSF1R-203ENST00000504875 RPGRIP1Q96KN7 1286 aa10.64□□□□□ -0.71
CSF1R-203ENST00000504875 OSBPL9Q96SU4 736 aa10.64□□□□□ -0.71
CSF1R-203ENST00000504875 GLIS2Q9BZE0 524 aaPredicted RBP10.64□□□□□ -0.71
CSF1R-203ENST00000504875 IKZF4Q9H2S9 585 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms