RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GIMAP8Q8ND71 665 aaPredicted RBP11.6□□□□□ -0.55
TPM3-217ENST00000504663 GLIS3Q8NEA6 775 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 HPS3Q969F9 1004 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 TRIM47Q96LD4 638 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 FIZ1Q96SL8 496 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 CEP89Q96ST8 783 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 TINF2Q9BSI4 451 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 BHMT2Q9H2M3 363 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 HOOK1Q9UJC3 728 aaKnown RBP11.6□□□□□ -0.55
TPM3-217ENST00000504663 PCDHA10Q9Y5I2 948 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 PVALEFA0A1B0GWK0 134 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 LGR5O75473 907 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 ALDH1A1P00352 501 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 ZNF865P0CJ78 1059 aaPredicted RBP11.59□□□□□ -0.55
TPM3-217ENST00000504663 CHRM1P11229 460 aaPredicted RBP11.59□□□□□ -0.55
TPM3-217ENST00000504663 QARSP47897 775 aaKnown RBP11.59□□□□□ -0.55
TPM3-217ENST00000504663 RARRES1P49788 294 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 MRE11P49959 708 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 ASIC1P78348 528 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 LACTBP83111 547 aaPredicted RBP11.59□□□□□ -0.55
TPM3-217ENST00000504663 STK4Q13043 487 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 COASYQ13057 564 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 CELF3Q5SZQ8 465 aaKnown RBP11.59□□□□□ -0.55
TPM3-217ENST00000504663 ZNF658Q5TYW1 1059 aaPredicted RBP11.59□□□□□ -0.55
TPM3-217ENST00000504663 OLFML2BQ68BL8 750 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 ANO5Q75V66 913 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 TPH2Q8IWU9 490 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
TPM3-217ENST00000504663 MSL3Q8N5Y2 521 aaKnown RBP11.59□□□□□ -0.55
TPM3-217ENST00000504663 GPR20Q99678 358 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 APBA2Q99767 749 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 REEP2Q9BRK0 252 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 ZSWIM4Q9H7M6 989 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 RNF186Q9NXI6 227 aa11.59□□□□□ -0.55
TPM3-217ENST00000504663 DBR1Q9UK59 544 aaKnown RBP11.59□□□□□ -0.55
TPM3-217ENST00000504663 MAFBQ9Y5Q3 323 aaPredicted RBP11.59□□□□□ -0.55
TPM3-217ENST00000504663 FRMPD3Q5JV73 1810 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 HTTP42858 3142 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 RSPH10B2B2RC85 870 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 B4DLN1 442 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 BACH1O14867 736 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 CAVIN2O95810 425 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 RSPH10BP0C881 870 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 HOXD8P13378 290 aaPredicted RBP11.58□□□□□ -0.56
TPM3-217ENST00000504663 GUCY2CP25092 1073 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 MAP2K2P36507 400 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 ADCYAP1R1P41586 468 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 ZNF131P52739 623 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 PSMC5P62195 406 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 IRF5Q13568 498 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 NEDD9Q14511 834 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 HSDL1Q3SXM5 330 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 PLA2G4FQ68DD2 849 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 KCNV1Q6PIU1 500 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 DYMQ7RTS9 669 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 ADSSL1Q8N142 457 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 AOPEPQ8N6M6 819 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 MLKLQ8NB16 471 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 AFAP1L1Q8TED9 768 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 SCFD2Q8WU76 684 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 SOCS4Q8WXH5 440 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 EMID1Q96A84 441 aaPredicted RBP11.58□□□□□ -0.56
TPM3-217ENST00000504663 NACC1Q96RE7 527 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 PDLIM7Q9NR12 457 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 GABBR1Q9UBS5 961 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 GABRQQ9UN88 632 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 DNM3Q9UQ16 869 aa11.58□□□□□ -0.56
TPM3-217ENST00000504663 IKBKBO14920 756 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 TBC1D8O95759 1140 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 PSAPP07602 524 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 SMPD1P17405 629 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 YWHABP31946 246 aaKnown RBP11.57□□□□□ -0.56
TPM3-217ENST00000504663 RGS2P41220 211 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 PRCPP42785 496 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 PMS1P54277 932 aaKnown RBP11.57□□□□□ -0.56
TPM3-217ENST00000504663 AMPD3Q01432 767 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 PRKCEQ02156 737 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 SP4Q02446 784 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 ACVR2BQ13705 512 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 UVSSAQ2YD98 709 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 SWSAP1Q6NVH7 229 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 DPP9Q86TI2 863 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 TRMT44Q8IYL2 757 aaKnown RBP11.57□□□□□ -0.56
TPM3-217ENST00000504663 TRPV1Q8NER1 839 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 CCDC34Q96HJ3 373 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 MPHOSPH6Q99547 160 aaKnown RBP11.57□□□□□ -0.56
TPM3-217ENST00000504663 XPNPEP1Q9NQW7 623 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 ANKEF1Q9NU02 776 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 RMND1Q9NWS8 449 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 GNEQ9Y223 722 aaKnown RBP11.57□□□□□ -0.56
TPM3-217ENST00000504663 EMSYQ7Z589 1322 aa11.57□□□□□ -0.56
TPM3-217ENST00000504663 ZBTB42B2RXF5 422 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 TNPO2O14787 897 aaKnown RBP11.56□□□□□ -0.56
TPM3-217ENST00000504663 SSBP05455 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
TPM3-217ENST00000504663 TXNP10599 105 aaKnown RBP11.56□□□□□ -0.56
TPM3-217ENST00000504663 ZNF18P17022 549 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 CYP2B6P20813 491 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 ERCC5P28715 1186 aaPredicted RBP11.56□□□□□ -0.56
TPM3-217ENST00000504663 HOXD13P35453 343 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 CASP5P51878 434 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms