RNA–Protein interactions for RNA: ENST00000504465.5

CAST-213, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-213ENST00000504465 AFPP02771 609 aaKnown RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 NR1D1P20393 614 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 POLD1P28340 1107 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 HSD17B3P37058 310 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 VPS72Q15906 364 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 PTGISQ16647 500 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 PTPROQ16827 1216 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 ICE2Q659A1 982 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 ALKBH5Q6P6C2 394 aaKnown RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 DDX42Q86XP3 938 aaKnown RBP eCLIP9.83□□□□□ -0.84
CAST-213ENST00000504465 SYT2Q8N9I0 419 aaPredicted RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 TAF4BQ92750 862 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 LENG9Q96B70 501 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 RBM17Q96I25 401 aaKnown RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 REEP2Q9BRK0 252 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 PAGR1Q9BTK6 254 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 MXD3Q9BW11 206 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 ZHX3Q9H4I2 956 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 ARMCX3Q9UH62 379 aaPredicted RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 BZW2Q9Y6E2 419 aaKnown RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 F8W031 263 aaPredicted RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 DDX3XO00571 662 aaKnown RBP eCLIP9.83□□□□□ -0.843e-8■■■□□ 18.7
CAST-213ENST00000504465 SART1O43290 800 aaKnown RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 CEP104O60308 925 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 PPP1R37O75864 691 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 ERLIN2O94905 339 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 ITGA4P13612 1032 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 HOXA10P31260 410 aaPredicted RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 FLT3P36888 993 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 MDH1P40925 334 aaKnown RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 FNTAP49354 379 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 CASP4P49662 377 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 PABPC4Q13310 644 aaKnown RBP eCLIP9.83□□□□□ -0.84
CAST-213ENST00000504465 EXOC3L4Q17RC7 722 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 BMT2Q1RMZ1 405 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 NAA35Q5VZE5 725 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 GJB7Q6PEY0 223 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 LRIG3Q6UXM1 1119 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 ZFPM1Q8IX07 1006 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 RASGEF1CQ8N431 466 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 OR2W6PQ8NHA6 318 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.83□□□□□ -0.84
CAST-213ENST00000504465 BORCS6Q96GS4 357 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 AP1M1Q9BXS5 423 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 DNAJC18Q9H819 358 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 USP40Q9NVE5 1235 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 PCDHA1Q9Y5I3 950 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 ASTN1O14525 1302 aa9.83□□□□□ -0.84
CAST-213ENST00000504465 ATXN2Q99700 1313 aaKnown RBP9.83□□□□□ -0.84
CAST-213ENST00000504465 RSPH10B2B2RC85 870 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 HMGB1P1B2RPK0 211 aaPredicted RBP9.82□□□□□ -0.84
CAST-213ENST00000504465 C6orf229H3BNL8 230 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 PDXKO00764 312 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 KRT18P05783 430 aaKnown RBP9.82□□□□□ -0.84
CAST-213ENST00000504465 RSPH10BP0C881 870 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 RPA1P27694 616 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 EPS15P42566 896 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 SEC24CP53992 1094 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 KCNA1Q09470 495 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 CEP85LQ5SZL2 805 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 CDC42EP5Q6NZY7 148 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 MOXD1Q6UVY6 613 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 B4GALNT4Q76KP1 1039 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 SIAH1Q8IUQ4 282 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 SLC35C1Q96A29 364 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 CALR3Q96L12 384 aaKnown RBP9.82□□□□□ -0.84
CAST-213ENST00000504465 SPAG5Q96R06 1193 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.82□□□□□ -0.84
CAST-213ENST00000504465 FBXL5Q9UKA1 691 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 FAM86B1E9PN63 330 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 MPHOSPH10O00566 681 aaKnown RBP9.82□□□□□ -0.84
CAST-213ENST00000504465 SERPINB2P05120 415 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 FAM86B2P0C5J1 330 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 GYS1P13807 737 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 INPP5BP32019 993 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 ARHGAP4P98171 946 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 ZNF844Q08AG5 666 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 NFIAQ12857 509 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 CUL1Q13616 776 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 Q4G0T1 1027 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 PRR16Q569H4 304 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 FBXW10Q5XX13 1052 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 APOBEC3HQ6NTF7 200 aaKnown RBP9.82□□□□□ -0.84
CAST-213ENST00000504465 KCNV1Q6PIU1 500 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 SUGP1Q8IWZ8 645 aaKnown RBP9.82□□□□□ -0.84
CAST-213ENST00000504465 SLFN12Q8IYM2 578 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 SLC30A5Q8TAD4 765 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 ZNF473Q8WTR7 871 aaKnown RBP9.82□□□□□ -0.84
CAST-213ENST00000504465 MKL1Q969V6 931 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 CCT8L2Q96SF2 557 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 DDX47Q9H0S4 455 aaKnown RBP9.82□□□□□ -0.84
CAST-213ENST00000504465 IKZF4Q9H2S9 585 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 SUCLA2Q9P2R7 463 aaPredicted RBP9.82□□□□□ -0.84
CAST-213ENST00000504465 NOC2LQ9Y3T9 749 aaKnown RBP9.82□□□□□ -0.84
CAST-213ENST00000504465 ATP8B3O60423 1300 aa9.82□□□□□ -0.84
CAST-213ENST00000504465 A0A0A6YYK5 440 aaPredicted RBP9.81□□□□□ -0.84
CAST-213ENST00000504465 MYO1FO00160 1098 aa9.81□□□□□ -0.84
CAST-213ENST00000504465 PGRMC1O00264 195 aaKnown RBP9.81□□□□□ -0.84
CAST-213ENST00000504465 RIMBP2O15034 1052 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms