RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 PHF20Q9BVI0 1012 aa15.51■□□□□ 0.07
HOXC6-203ENST00000504315 TRPC6Q9Y210 931 aa15.51■□□□□ 0.07
HOXC6-203ENST00000504315 PCDHA2Q9Y5H9 948 aa15.51■□□□□ 0.07
HOXC6-203ENST00000504315 MAFBQ9Y5Q3 323 aaPredicted RBP15.51■□□□□ 0.07
HOXC6-203ENST00000504315 MYO7AQ13402 2215 aa15.51■□□□□ 0.07
HOXC6-203ENST00000504315 ARID2Q68CP9 1835 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 IGSF9BQ9UPX0 1349 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 RBAK-RBAKDNI3L0D1 243 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 MSH4O15457 936 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 HBP1O60381 514 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 ATP4AP20648 1035 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 ME3Q16798 604 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 Q4G0T1 1027 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.5■□□□□ 0.07
HOXC6-203ENST00000504315 TMCO2Q7Z6W1 182 aaPredicted RBP15.5■□□□□ 0.07
HOXC6-203ENST00000504315 DNAJB3Q8WWF6 145 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 IFIH1Q9BYX4 1025 aaKnown RBP15.5■□□□□ 0.07
HOXC6-203ENST00000504315 ZNF302Q9NR11 478 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 SQORQ9Y6N5 450 aa15.5■□□□□ 0.07
HOXC6-203ENST00000504315 KDM3AQ9Y4C1 1321 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 SMIM35A0A1B0GVV1 85 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 ZBTB42B2RXF5 422 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 BACH1O14867 736 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 POU3F3P20264 500 aaPredicted RBP15.49■□□□□ 0.07
HOXC6-203ENST00000504315 IGBP1P78318 339 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 PDXDC2PQ6P474 469 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 KRT25Q7Z3Z0 450 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.49■□□□□ 0.07
HOXC6-203ENST00000504315 SLC5A5Q92911 643 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 GTF3C6Q969F1 213 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 RIT2Q99578 217 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 RAD9AQ99638 391 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 PCDHA10Q9Y5I2 948 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 CDY2AQ9Y6F7 541 aa15.49■□□□□ 0.07
HOXC6-203ENST00000504315 REV3LO60673 3130 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.48■□□□□ 0.07
HOXC6-203ENST00000504315 LCHNA4D1U4 455 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 EPOPA6NHQ4 379 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 WDR64B1ANS9 1081 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 LARGE1O95461 756 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 AMHP03971 560 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 PSAPP07602 524 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 GHRP10912 638 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 FDPSP14324 419 aaKnown RBP15.48■□□□□ 0.07
HOXC6-203ENST00000504315 MRPS6P82932 125 aaKnown RBP15.48■□□□□ 0.07
HOXC6-203ENST00000504315 HTRA4P83105 476 aaPredicted RBP15.48■□□□□ 0.07
HOXC6-203ENST00000504315 LPIN1Q14693 890 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 NONOQ15233 471 aaKnown RBP eCLIP15.48■□□□□ 0.074e-7■■■■■ 30
HOXC6-203ENST00000504315 C8orf34Q49A92 452 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 FBXO47Q5MNV8 452 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 SWSAP1Q6NVH7 229 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 MTHFD1LQ6UB35 978 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 B3GNT9Q6UX72 402 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 TSHZ1Q6ZSZ6 1077 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 NME8Q8N427 588 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 USP38Q8NB14 1042 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 TRAPPC12Q8WVT3 735 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 BBXQ8WY36 941 aaPredicted RBP15.48■□□□□ 0.07
HOXC6-203ENST00000504315 TOP1MTQ969P6 601 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 ZBTB10Q96DT7 871 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 UIMC1Q96RL1 719 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 KCNJ14Q9UNX9 436 aa15.48■□□□□ 0.07
HOXC6-203ENST00000504315 PSMD10O75832 226 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 XBP1P17861 261 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 SFNP31947 248 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 NEK4P51957 841 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 ZNF484Q5JVG2 852 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 IER5Q5VY09 327 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 MYOCDQ8IZQ8 938 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 ETNPPLQ8TBG4 499 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 SP7Q8TDD2 431 aaPredicted RBP15.47■□□□□ 0.07
HOXC6-203ENST00000504315 FAM49AQ9H0Q0 323 aaPredicted RBP15.47■□□□□ 0.07
HOXC6-203ENST00000504315 ORC3Q9UBD5 711 aaPredicted RBP15.47■□□□□ 0.07
HOXC6-203ENST00000504315 TCEAL9Q9UHQ7 104 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 INSL6Q9Y581 213 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 TRPV2Q9Y5S1 764 aa15.47■□□□□ 0.07
HOXC6-203ENST00000504315 TTC28Q96AY4 2481 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 LINC01553A4QN01 128 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 TDP2O95551 362 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 KLRC1P26715 233 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 JAK3P52333 1124 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 ST3GAL1Q11201 340 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 LRCH2Q5VUJ6 765 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 SPRED2Q7Z698 418 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 NSUN7Q8NE18 718 aaKnown RBP15.46■□□□□ 0.07
HOXC6-203ENST00000504315 RDM1Q8NG50 284 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 WASF1Q92558 559 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 ZBED2Q9BTP6 218 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 AGO3Q9H9G7 860 aaKnown RBP15.46■□□□□ 0.07
HOXC6-203ENST00000504315 DISC1Q9NRI5 854 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 GABBR1Q9UBS5 961 aa15.46■□□□□ 0.07
HOXC6-203ENST00000504315 M0QZ92 97 aa15.45■□□□□ 0.06
HOXC6-203ENST00000504315 ZNF862O60290 1169 aa15.45■□□□□ 0.06
HOXC6-203ENST00000504315 LPXNO60711 386 aa15.45■□□□□ 0.06
HOXC6-203ENST00000504315 GAS7O60861 476 aa15.45■□□□□ 0.06
HOXC6-203ENST00000504315 C22orf31O95567 290 aa15.45■□□□□ 0.06
HOXC6-203ENST00000504315 ERVK-21P61565 698 aa15.45■□□□□ 0.06
HOXC6-203ENST00000504315 INF2Q27J81 1249 aa15.45■□□□□ 0.06
HOXC6-203ENST00000504315 PPP4R3AQ6IN85 833 aa15.45■□□□□ 0.06
HOXC6-203ENST00000504315 FAM43BQ6ZT52 329 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms