RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 MCM3P25205 808 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 NFKBIAP25963 317 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 IRAK1P51617 712 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 RAPGEF1Q13905 1077 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 LLGL1Q15334 1064 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 SGSM1Q2NKQ1 1148 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 CFAP58Q5T655 872 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 C10orf62Q5T681 223 aaPredicted RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 CYB5D1Q6P9G0 228 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 MIGA2Q7L4E1 593 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 CMTR1Q8N1G2 835 aaKnown RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 IGSF22Q8N9C0 903 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 NSMCE1Q8WV22 266 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 APPBP2Q92624 585 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 RPGRQ92834 1020 aaKnown RBP4□□□□□ -1.77
PCDH11X-208ENST00000504220 SLF1Q9BQI6 1058 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 SMARCAD1Q9H4L7 1026 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 AS3MTQ9HBK9 375 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 ATXN10Q9UBB4 475 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 TACC3Q9Y6A5 838 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 KCPQ6ZWJ8 1503 aa4□□□□□ -1.77
PCDH11X-208ENST00000504220 POTEB2H3BUK9 544 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 STXBP3O00186 592 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 PSMA7O14818 248 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 POLR2DO15514 142 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 KRT86O43790 486 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ZBED4O75132 1171 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 SLC5A1P13866 664 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ARL1P40616 181 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ZNF75DP51815 510 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 FANCCQ00597 558 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 TRIM28Q13263 835 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 TTF1Q15361 905 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 DIXDC1Q155Q3 683 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 CDONQ4KMG0 1287 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 C10orf76Q5T2E6 689 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 IFIT1BQ5T764 474 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 EGFLAMQ63HQ2 1017 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 RASGRP2Q7LDG7 609 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 TRIM50Q86XT4 487 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 TMEM139Q8IV31 216 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 LRRC43Q8N309 656 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ANKRD13CQ8N6S4 541 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 UBLCP1Q8WVY7 318 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 DPF3Q92784 378 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ZNF594Q96JF6 807 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 RMDN2Q96LZ7 410 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 DBNDD2Q9BQY9 259 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 MAK16Q9BXY0 300 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 RAB34Q9BZG1 259 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 TRIM4Q9C037 500 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 WNT8AQ9H1J5 351 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 RNF41Q9H4P4 317 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ZBTB21Q9ULJ3 1066 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 C15orf41Q9Y2V0 281 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 GOLGB1Q14789 3259 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 TANC1Q9C0D5 1861 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 MAGEB3O15480 346 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 RNF113AO15541 343 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 EVI5O60447 810 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 GREM1O60565 184 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 USP2O75604 605 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ZMYND10O75800 440 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 EEF2P13639 858 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 SELLP14151 372 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 KRT9P35527 623 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 BAG6P46379 1132 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 TNNI2P48788 182 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ATP1A2P50993 1020 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 MYL5Q02045 173 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 SSPNQ14714 243 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 SF3B3Q15393 1217 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 CNGA3Q16281 694 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 LONRF2Q1L5Z9 754 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 DAAM2Q86T65 1068 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 KLHL7Q8IXQ5 586 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 CCDC65Q8IXS2 484 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 FAM76AQ8TAV0 307 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 LEO1Q8WVC0 666 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ANKRD49Q8WVL7 239 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 OSBPL9Q96SU4 736 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 XPO4Q9C0E2 1151 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ABCG4Q9H172 646 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 SYNCQ9H7C4 482 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 TAB2Q9NYJ8 693 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 PKD2L1Q9P0L9 805 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 ADD3Q9UEY8 706 aaKnown RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 SNX14Q9Y5W7 946 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 CAPN8A6NHC0 703 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 BUB1BO60566 1050 aaPredicted RBP3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 LILRB3O75022 631 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 NR1I2O75469 434 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 POTEJP0CG39 1038 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 CCDC166P0CW27 439 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 GNAZP19086 355 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 LSP1P33241 339 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 S100A5P33763 92 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 NR2C2P49116 596 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 VAV2P52735 878 aa3.99□□□□□ -1.77
PCDH11X-208ENST00000504220 CLNS1AP54105 237 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms