RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 FAM133BQ5BKY9 247 aaKnown RBP6.47□□□□□ -1.37
LINC01340-201ENST00000504012 TNFAIP8L3Q5GJ75 292 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 TCP11X2Q5H9J9 407 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 FKBP15Q5T1M5 1219 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 SYDE2Q5VT97 1194 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 SCUBE1Q8IWY4 988 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 LRRC34Q8IZ02 419 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 MB21D1Q8N884 522 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 PPFIBP2Q8ND30 876 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.47□□□□□ -1.37
LINC01340-201ENST00000504012 ZNF507Q8TCN5 953 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 NAT14Q8WUY8 206 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 MAGOHBQ96A72 148 aaKnown RBP6.47□□□□□ -1.37
LINC01340-201ENST00000504012 OTUD5Q96G74 571 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 POM121Q96HA1 1249 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 TCEANC2Q96MN5 208 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 ZMAT2Q96NC0 199 aaKnown RBP6.47□□□□□ -1.37
LINC01340-201ENST00000504012 NUDCD1Q96RS6 583 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 EDEM3Q9BZQ6 932 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 ASCC2Q9H1I8 757 aaPredicted RBP6.47□□□□□ -1.37
LINC01340-201ENST00000504012 MRPL46Q9H2W6 279 aaKnown RBP6.47□□□□□ -1.37
LINC01340-201ENST00000504012 RBM12Q9NTZ6 932 aaKnown RBP6.47□□□□□ -1.37
LINC01340-201ENST00000504012 BIN2Q9UBW5 565 aaPredicted RBP6.47□□□□□ -1.37
LINC01340-201ENST00000504012 NKX1-2Q9UD57 310 aaPredicted RBP6.47□□□□□ -1.37
LINC01340-201ENST00000504012 ZNF212Q9UDV6 495 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 TRIM10Q9UDY6 481 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 ZNHIT2Q9UHR6 403 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 INTUQ9ULD6 942 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 STXBP5LQ9Y2K9 1186 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 SCINQ9Y6U3 715 aa6.47□□□□□ -1.37
LINC01340-201ENST00000504012 MINK1Q8N4C8 1332 aaPredicted RBP6.47□□□□□ -1.37
LINC01340-201ENST00000504012 AKAP12Q02952 1782 aa6.46□□□□□ -1.37
LINC01340-201ENST00000504012 TTC26A0AVF1 554 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 TRIM43BA6NCK2 446 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 LGALS16A8MUM7 142 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 CCDC188H7C350 402 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 RNF225M0QZC1 329 aaPredicted RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 MATN2O00339 956 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 AP1G1O43747 822 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 DTNBO60941 627 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 ATP9AO75110 1047 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 ASMTLO95671 621 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 GNA14O95837 355 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 POLR3DP05423 398 aaPredicted RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 LYNP07948 512 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 ZFYP08048 801 aaPredicted RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 CYP21A2P08686 494 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 HMOX1P09601 288 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 PDGFRBP09619 1106 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 VAV1P15498 845 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 VARSP26640 1264 aaKnown RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 TUBA4AP68366 448 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 DCTN2Q13561 401 aaKnown RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 SPCS2Q15005 226 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 NONOQ15233 471 aaKnown RBP eCLIP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 NDUFA5Q16718 116 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 MCMDC2Q4G0Z9 681 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 HSP90AA5PQ58FG0 334 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 GRAMD4Q6IC98 578 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 Q6ZNX1 250 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 MARK2Q7KZI7 788 aaKnown RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 NRKQ7Z2Y5 1582 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 CATIPQ7Z7H3 387 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 LONP2Q86WA8 852 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 ST13P4Q8IZP2 240 aaPredicted RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 NUP93Q8N1F7 819 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 PDCD7Q8N8D1 485 aaKnown RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 LRRC8CQ8TDW0 803 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 PRCCQ92733 491 aaPredicted RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 DDX12PQ92771 950 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 ATP6V0A1Q93050 837 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 FERMT2Q96AC1 680 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 VTI1AQ96AJ9 217 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 RNF25Q96BH1 459 aaPredicted RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 VPS50Q96JG6 964 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 SH3GL1Q99961 368 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 UBAC1Q9BSL1 405 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 TLR10Q9BXR5 811 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 TXLNGYQ9BZA5 131 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 LACRTQ9GZZ8 138 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 SLITRK6Q9H5Y7 841 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 NHEJ1Q9H9Q4 299 aaPredicted RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 PICK1Q9NRD5 415 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 ABCF3Q9NUQ8 709 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 INTS9Q9NV88 658 aaKnown RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 NLRP2Q9NX02 1062 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 STK32BQ9NY57 414 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 BTBD7Q9P203 1132 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 DKK3Q9UBP4 350 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 SEC63Q9UGP8 760 aaKnown RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 SERTAD1Q9UHV2 236 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 EFR3BQ9Y2G0 817 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 ZNF330Q9Y3S2 320 aaPredicted RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 SRPRBQ9Y5M8 271 aaKnown RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 PDS5AQ29RF7 1337 aaKnown RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 PASKQ96RG2 1323 aa6.46□□□□□ -1.38
LINC01340-201ENST00000504012 MAP2P11137 1827 aaKnown RBP6.46□□□□□ -1.38
LINC01340-201ENST00000504012 BTNL10A8MVZ5 291 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms