RNA–Protein interactions for RNA: ENST00000503495.5

DDR1-249, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-249ENST00000503495 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
DDR1-249ENST00000503495 NPAS4Q8IUM7 802 aa17.17■□□□□ 0.34
DDR1-249ENST00000503495 SDF4Q9BRK5 362 aa17.17■□□□□ 0.34
DDR1-249ENST00000503495 CELF4Q9BZC1 486 aaKnown RBP17.17■□□□□ 0.34
DDR1-249ENST00000503495 FAM49AQ9H0Q0 323 aaPredicted RBP17.17■□□□□ 0.34
DDR1-249ENST00000503495 RBM28Q9NW13 759 aaKnown RBP17.17■□□□□ 0.34
DDR1-249ENST00000503495 LOXHD1Q8IVV2 1947 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 IGKV6D-21A0A0A0MT36 114 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 hCG_1984214I3L0E3 225 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 MEIS1O00470 390 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 MBTPS2O43462 519 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 DLX2Q07687 328 aaPredicted RBP17.16■□□□□ 0.34
DDR1-249ENST00000503495 ADAM15Q13444 863 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 TYW1BQ6NUM6 668 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 PPP1R18Q6NYC8 613 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 APOA5Q6Q788 366 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 ZNF713Q8N859 430 aaPredicted RBP17.16■□□□□ 0.34
DDR1-249ENST00000503495 SPPL3Q8TCT6 385 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 UPF3BQ9BZI7 483 aaKnown RBP17.16■□□□□ 0.34
DDR1-249ENST00000503495 ALG13Q9NP73 1137 aaKnown RBP17.16■□□□□ 0.34
DDR1-249ENST00000503495 TRPC6Q9Y210 931 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 MRPL42Q9Y6G3 142 aaKnown RBP17.16■□□□□ 0.34
DDR1-249ENST00000503495 CNTNAP5Q8WYK1 1306 aa17.16■□□□□ 0.34
DDR1-249ENST00000503495 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
DDR1-249ENST00000503495 NAPAP54920 295 aa17.15■□□□□ 0.34
DDR1-249ENST00000503495 EXOSC10Q01780 885 aaKnown RBP17.15■□□□□ 0.34
DDR1-249ENST00000503495 FUT2Q10981 343 aa17.15■□□□□ 0.34
DDR1-249ENST00000503495 ITGB3BPQ13352 177 aaPredicted RBP17.15■□□□□ 0.34
DDR1-249ENST00000503495 MTHFD1LQ6UB35 978 aa17.15■□□□□ 0.34
DDR1-249ENST00000503495 TRAPPC12Q8WVT3 735 aa17.15■□□□□ 0.34
DDR1-249ENST00000503495 NEK1Q96PY6 1258 aa17.15■□□□□ 0.34
DDR1-249ENST00000503495 GLT8D2Q9H1C3 349 aa17.15■□□□□ 0.34
DDR1-249ENST00000503495 AGO4Q9HCK5 861 aaKnown RBP17.15■□□□□ 0.34
DDR1-249ENST00000503495 ANO2Q9NQ90 1003 aa17.15■□□□□ 0.34
DDR1-249ENST00000503495 PIEZO1Q92508 2521 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 ITGB1P05556 798 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 SCG2P13521 617 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 KLRC1P26715 233 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 GTF2F1P35269 517 aaKnown RBP eCLIP17.14■□□□□ 0.33
DDR1-249ENST00000503495 IRS1P35568 1242 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 SREBF1P36956 1147 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 KRT76Q01546 638 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 TMEM62Q0P6H9 643 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 PAK2Q13177 524 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 AP3B2Q13367 1082 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 CSPP1Q1MSJ5 1256 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 TSGA10IPQ3SY00 556 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 RNF20Q5VTR2 975 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 ABHD15Q6UXT9 468 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 NIPA1Q7RTP0 329 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 POP1Q99575 1024 aaKnown RBP17.14■□□□□ 0.33
DDR1-249ENST00000503495 ANO3Q9BYT9 981 aa17.14■□□□□ 0.33
DDR1-249ENST00000503495 V9GY48 417 aaPredicted RBP17.14■□□□□ 0.33
DDR1-249ENST00000503495 KIAA1671Q9BY89 1806 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 SMCO2A6NFE2 343 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 STXBP3O00186 592 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 HBP1O60381 514 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 TBX10O75333 385 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 DNAJB1P25685 340 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 ADCY7P51828 1080 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
DDR1-249ENST00000503495 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
DDR1-249ENST00000503495 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
DDR1-249ENST00000503495 KLHL23Q8NBE8 558 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 PGBD1Q96JS3 809 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 MSLNLQ96KJ4 702 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 TMX1Q9H3N1 280 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 IGFLR1Q9H665 355 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
DDR1-249ENST00000503495 C5orf42Q9H799 3197 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 LINC01565O15544 149 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 ZBTB43O43298 467 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 EYA4O95677 639 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 SARSP49591 514 aaKnown RBP17.12■□□□□ 0.33
DDR1-249ENST00000503495 CLUL1Q15846 466 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 RTN1Q16799 776 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 ATP8B4Q8TF62 1192 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 POF1BQ8WVV4 589 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 KCNH6Q9H252 994 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
DDR1-249ENST00000503495 CD207Q9UJ71 328 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 COL1A2P08123 1366 aa17.12■□□□□ 0.33
DDR1-249ENST00000503495 DHX15O43143 795 aaKnown RBP17.11■□□□□ 0.33
DDR1-249ENST00000503495 CCNE2O96020 404 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 ZNF76P36508 570 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 RCAN1P53805 252 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 NFX1Q12986 1120 aaKnown RBP17.11■□□□□ 0.33
DDR1-249ENST00000503495 PAN2Q504Q3 1202 aaKnown RBP17.11■□□□□ 0.33
DDR1-249ENST00000503495 HERC4Q5GLZ8 1057 aaPredicted RBP17.11■□□□□ 0.33
DDR1-249ENST00000503495 ZNF484Q5JVG2 852 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 ODR4Q5SWX8 454 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 FAM160B1Q5W0V3 765 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 EFHBQ8N7U6 833 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 CRYGNQ8WXF5 182 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 UIMC1Q96RL1 719 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 CDHR5Q9HBB8 845 aa17.11■□□□□ 0.33
DDR1-249ENST00000503495 ERVK-5Q9HDB9 667 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms