RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 PIK3R6Q5UE93 754 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 CDCA2Q69YH5 1023 aaPredicted RBP3.66□□□□□ -1.82
SMAD1-203ENST00000502342 CNNM4Q6P4Q7 775 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 HHIPL2Q6UWX4 724 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 DHX37Q8IY37 1157 aaKnown RBP3.66□□□□□ -1.82
SMAD1-203ENST00000502342 KBTBD2Q8IY47 623 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 HIPK4Q8NE63 616 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 APPBP2Q92624 585 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 MBD6Q96DN6 1003 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 WNK4Q96J92 1243 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 GBP4Q96PP9 640 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 AMNQ9BXJ7 453 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 TMEM260Q9NX78 707 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 GALNT8Q9NY28 637 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 MAGEL2Q9UJ55 1249 aa3.66□□□□□ -1.82
SMAD1-203ENST00000502342 MRPL42Q9Y6G3 142 aaKnown RBP3.66□□□□□ -1.82
SMAD1-203ENST00000502342 PTPDC1A2A3K4 754 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 C9orf118A6NHY6 69 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 RASSF10A6NK89 507 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 TRAF5O00463 557 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 FOXP2O15409 715 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 ASLP04424 464 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 RANGAP1P46060 587 aaPredicted RBP3.65□□□□□ -1.83
SMAD1-203ENST00000502342 NEK4P51957 841 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 RRADP55042 308 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 PPP2CBP62714 309 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 PPP2CAP67775 309 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 IRF9Q00978 393 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 CD83Q01151 205 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 ARHGAP44Q17R89 818 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 TKFCQ3LXA3 575 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 ZCCHC8Q6NZY4 707 aaKnown RBP3.65□□□□□ -1.83
SMAD1-203ENST00000502342 Q6ZUG5 572 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 C16orf86Q6ZW13 317 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 NOSTRINQ8IVI9 506 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 NXPE1Q8N323 547 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 SYNPOQ8N3V7 929 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 KLHL36Q8N4N3 616 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 ASB15Q8WXK1 588 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 DLG3Q92796 817 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 CABP5Q9NP86 173 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 INCENPQ9NQS7 918 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 KCNH7Q9NS40 1196 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 BTBD7Q9P203 1132 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 NCANO14594 1321 aa3.65□□□□□ -1.83
SMAD1-203ENST00000502342 NPEPPSL1A6NEC2 478 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 DVL2O14641 736 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 MPIG6BO95866 241 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 CHGBP05060 677 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 ZNF888P0CJ79 500 aaPredicted RBP3.64□□□□□ -1.83
SMAD1-203ENST00000502342 SLC9A1P19634 815 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 AOAHP28039 575 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 ECE1P42892 770 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 KCNQ1P51787 676 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 KIF11P52732 1056 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 HERVK_113P62684 666 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 IL13RA1P78552 427 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 GLB1LQ6UWU2 654 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 ARHGEF18Q6ZSZ5 1173 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 PRRT2Q7Z6L0 340 aaPredicted RBP3.64□□□□□ -1.83
SMAD1-203ENST00000502342 PLEKHH3Q7Z736 793 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 JAZF1Q86VZ6 243 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 LOXL4Q96JB6 756 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 BOCQ9BWV1 1114 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 PPP4R1LQ9P1A2 415 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 ADAM29Q9UKF5 820 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 B3GALT1Q9Y5Z6 326 aa3.64□□□□□ -1.83
SMAD1-203ENST00000502342 GOLGA6L22H0YM25 854 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 K7ESM1 405 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 LAMTOR5O43504 91 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 KPNA6O60684 536 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 CDC45O75419 566 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 RFPL3O75679 317 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 PLATP00750 562 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 ITGB3P05106 788 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 CSF2RBP32927 897 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 MECP2P51608 486 aaKnown RBP3.63□□□□□ -1.83
SMAD1-203ENST00000502342 MOGSQ13724 837 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 PCBP1Q15365 356 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMAD1-203ENST00000502342 SURF1Q15526 300 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 ZNF174Q15697 407 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 CATSPEREQ5SY80 951 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 OTOP2Q7RTS6 562 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 AJUBAQ96IF1 538 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 RBM15Q96T37 977 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMAD1-203ENST00000502342 MTFR1LQ9H019 292 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 PCIF1Q9H4Z3 704 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 IFT57Q9NWB7 429 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 H2AFY2Q9P0M6 372 aaPredicted RBP3.63□□□□□ -1.83
SMAD1-203ENST00000502342 MAGEC2Q9UBF1 373 aaPredicted RBP3.63□□□□□ -1.83
SMAD1-203ENST00000502342 ST6GALNAC2Q9UJ37 374 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 ZKSCAN5Q9Y2L8 839 aa3.63□□□□□ -1.83
SMAD1-203ENST00000502342 H7C1D1 291 aa3.62□□□□□ -1.83
SMAD1-203ENST00000502342 PTX3P26022 381 aaPredicted RBP3.62□□□□□ -1.83
SMAD1-203ENST00000502342 POLD1P28340 1107 aa3.62□□□□□ -1.83
SMAD1-203ENST00000502342 USP10Q14694 798 aaKnown RBP3.62□□□□□ -1.83
SMAD1-203ENST00000502342 CC2D1AQ6P1N0 951 aaPredicted RBP3.62□□□□□ -1.83
SMAD1-203ENST00000502342 LARP4Q71RC2 724 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMAD1-203ENST00000502342 RALYLQ86SE5 291 aaKnown RBP3.62□□□□□ -1.83
SMAD1-203ENST00000502342 NOP9Q86U38 636 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms