RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 LOC730098B7Z3J9 87 aa8.56□□□□□ -1.04
CRNDE-202ENST00000502066 SNRPA1P09661 255 aaKnown RBP8.56□□□□□ -1.04
CRNDE-202ENST00000502066 TNNI2P48788 182 aa8.56□□□□□ -1.04
CRNDE-202ENST00000502066 EHHADHQ08426 723 aa8.56□□□□□ -1.04
CRNDE-202ENST00000502066 MIGA2Q7L4E1 593 aa8.56□□□□□ -1.04
CRNDE-202ENST00000502066 PLD6Q8N2A8 252 aaKnown RBP8.56□□□□□ -1.04
CRNDE-202ENST00000502066 ZNF428Q96B54 188 aa8.56□□□□□ -1.04
CRNDE-202ENST00000502066 APBA2Q99767 749 aa8.56□□□□□ -1.04
CRNDE-202ENST00000502066 CORO1BQ9BR76 489 aa8.56□□□□□ -1.04
CRNDE-202ENST00000502066 ANO2Q9NQ90 1003 aa8.56□□□□□ -1.04
CRNDE-202ENST00000502066 PPP1R9AQ9ULJ8 1098 aa8.56□□□□□ -1.04
CRNDE-202ENST00000502066 KALRNO60229 2985 aa8.56□□□□□ -1.04
CRNDE-202ENST00000502066 FBN2P35556 2912 aa8.55□□□□□ -1.04
CRNDE-202ENST00000502066 ENO4A6NNW6 628 aa8.55□□□□□ -1.04
CRNDE-202ENST00000502066 GCLCP48506 637 aaPredicted RBP8.55□□□□□ -1.04
CRNDE-202ENST00000502066 CDK5R2Q13319 367 aa8.55□□□□□ -1.04
CRNDE-202ENST00000502066 CERS5Q8N5B7 392 aa8.55□□□□□ -1.04
CRNDE-202ENST00000502066 ZCCHC14Q8WYQ9 949 aaKnown RBP8.55□□□□□ -1.04
CRNDE-202ENST00000502066 USP18Q9UMW8 372 aa8.55□□□□□ -1.04
CRNDE-202ENST00000502066 SIPA1L3O60292 1781 aaPredicted RBP8.55□□□□□ -1.04
CRNDE-202ENST00000502066 DMXL2Q8TDJ6 3036 aa8.55□□□□□ -1.04
CRNDE-202ENST00000502066 RFX7Q2KHR2 1363 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 A0A1B0GUL7 405 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 A0A1W2PQ45 241 aaPredicted RBP8.54□□□□□ -1.04
CRNDE-202ENST00000502066 A0A1W2PQY0 241 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 SLC30A4O14863 429 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 ARP10275 920 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 CD8BP10966 210 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 CYP2C19P33261 490 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 LTBRP36941 435 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 USP5P45974 858 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 PTPN21Q16825 1174 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 ZNF605Q86T29 641 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 ZFPM1Q8IX07 1006 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 SUMF1Q8NBK3 374 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 ZNF341Q9BYN7 854 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 COA1Q9GZY4 146 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.54□□□□□ -1.04
CRNDE-202ENST00000502066 TRMT112Q9UI30 125 aaKnown RBP8.54□□□□□ -1.04
CRNDE-202ENST00000502066 ADAMTS6Q9UKP5 1117 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 U3KQE9 123 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 XDHP47989 1333 aa8.54□□□□□ -1.04
CRNDE-202ENST00000502066 BIN1O00499 593 aa8.53□□□□□ -1.04
CRNDE-202ENST00000502066 PEX10O60683 326 aa8.53□□□□□ -1.04
CRNDE-202ENST00000502066 FAM87AP0C7U9 286 aa8.53□□□□□ -1.04
CRNDE-202ENST00000502066 NPR3P17342 541 aa8.53□□□□□ -1.04
CRNDE-202ENST00000502066 NCLP19338 710 aaKnown RBP8.53□□□□□ -1.04
CRNDE-202ENST00000502066 CBX2Q14781 532 aaPredicted RBP8.53□□□□□ -1.04
CRNDE-202ENST00000502066 MTHFSDQ2M296 383 aaKnown RBP8.53□□□□□ -1.04
CRNDE-202ENST00000502066 CCDC105Q8IYK2 499 aa8.53□□□□□ -1.04
CRNDE-202ENST00000502066 WDR18Q9BV38 432 aa8.53□□□□□ -1.04
CRNDE-202ENST00000502066 GSX1Q9H4S2 264 aaPredicted RBP8.53□□□□□ -1.04
CRNDE-202ENST00000502066 RC3H2Q9HBD1 1191 aaKnown RBP8.53□□□□□ -1.04
CRNDE-202ENST00000502066 WDFY3Q8IZQ1 3526 aa8.53□□□□□ -1.04
CRNDE-202ENST00000502066 PTPRFP10586 1907 aa8.52□□□□□ -1.04
CRNDE-202ENST00000502066 MED23Q9ULK4 1368 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 KIF28PB7ZC32 967 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 J3QKU1 62 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 FAM13AO94988 1023 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 RNASE1P07998 156 aaKnown RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 CLCN5P51795 746 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 DLX2Q07687 328 aaPredicted RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 SMAD4Q13485 552 aaKnown RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 SF3B3Q15393 1217 aaKnown RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 TCEAL5Q5H9L2 206 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 TREML2Q5T2D2 321 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 DCAF15Q66K64 600 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 RPAINQ86UA6 219 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 TDRD7Q8NHU6 1098 aaKnown RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 FAM168AQ92567 244 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 CCDC97Q96F63 343 aaPredicted RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 EDC3Q96F86 508 aaKnown RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 WDR89Q96FK6 387 aaPredicted RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 MFSD1Q9H3U5 465 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 CLMPQ9H6B4 373 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 MBNL3Q9NUK0 354 aaKnown RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 AGTPBP1Q9UPW5 1226 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 RRP7AQ9Y3A4 280 aaKnown RBP8.52□□□□□ -1.05
CRNDE-202ENST00000502066 ZHX2Q9Y6X8 837 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 A0A1B0GUL6 1792 aa8.52□□□□□ -1.05
CRNDE-202ENST00000502066 DBX1A6NMT0 343 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
CRNDE-202ENST00000502066 ABL1P00519 1130 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 CYBAP13498 195 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 LIG1P18858 919 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 ICAM3P32942 547 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 ATP2B2Q01814 1243 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 TTLL4Q14679 1199 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 COL28A1Q2UY09 1125 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 CYP27C1Q4G0S4 372 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 FAM47AQ5JRC9 791 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 HP1BP3Q5SSJ5 553 aaPredicted RBP8.51□□□□□ -1.05
CRNDE-202ENST00000502066 GALNT12Q8IXK2 581 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 STK11IPQ8N1F8 1099 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 DTWD2Q8NBA8 298 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 IL17REQ8NFR9 667 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 FANCMQ8IYD8 2048 aa8.51□□□□□ -1.05
CRNDE-202ENST00000502066 PI15O43692 258 aa8.5□□□□□ -1.05
CRNDE-202ENST00000502066 C1QL1O75973 258 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms