RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 IGLV3-22A0A075B6J6 115 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 AFPP02771 609 aaKnown RBP10.83□□□□□ -0.68
CLIP1-204ENST00000501271 CAPN2P17655 700 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 GGCXP38435 758 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 ECE1P42892 770 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 DNA2P51530 1060 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 BMT2Q1RMZ1 405 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 MUM1L1Q5H9M0 696 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 DCAF17Q5H9S7 520 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-204ENST00000501271 KIAA1755Q5JYT7 1200 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.68
CLIP1-204ENST00000501271 PRMT6Q96LA8 375 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-204ENST00000501271 CSRNP1Q96S65 589 aa10.83□□□□□ -0.68
CLIP1-204ENST00000501271 A0A0U1RQG5 324 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 PDXKO00764 312 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 ENTPD3O75355 529 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 NR3C1P04150 777 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 CYP3A4P08684 503 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 UCHL3P15374 230 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 ZNF76P36508 570 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 PAFAH1B1P43034 410 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 CASP4P49662 377 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 PTK2Q05397 1052 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 KIAA0753Q2KHM9 967 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 IRF2BP2Q7Z5L9 587 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 GOLGA5Q8TBA6 731 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 POLR3CQ9BUI4 534 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 WDR18Q9BV38 432 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 IKZF4Q9H2S9 585 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 LUC7LQ9NQ29 371 aaKnown RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 PLCB1Q9NQ66 1216 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 TYW1Q9NV66 732 aaKnown RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 STIM2Q9P246 746 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 TSKSQ9UJT2 592 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 AJAP1Q9UKB5 411 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 PACSIN2Q9UNF0 486 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 RABGAP1Q9Y3P9 1069 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 PCDHGC5Q9Y5F6 944 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 PSME4Q14997 1843 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 MYH11P35749 1972 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 GRID2IPA4D2P6 1211 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 PIK3CDO00329 1044 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 CALUO43852 315 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 GCNT3O95395 438 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 EYA4O95677 639 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 XRCC5P13010 732 aaKnown RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 PON1P27169 355 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 CHRNA5P30532 468 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 ACTN2P35609 894 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 CTTNQ14247 550 aaKnown RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 C8orf74Q6P047 294 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 SND1Q7KZF4 910 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 ZNF571Q7Z3V5 609 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 DNAAF5Q86Y56 855 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 RBM46Q8TBY0 533 aaKnown RBP10.82□□□□□ -0.68
CLIP1-204ENST00000501271 PIGOQ8TEQ8 1089 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 RUBCNQ92622 972 aa10.82□□□□□ -0.68
CLIP1-204ENST00000501271 ZMYM2Q9UBW7 1377 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-204ENST00000501271 SFI1A8K8P3 1242 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 YDJCA8MPS7 323 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 H0YIN7 160 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 CLIC2O15247 247 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 TBCAO75347 108 aaKnown RBP10.81□□□□□ -0.68
CLIP1-204ENST00000501271 STAT2P52630 851 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 EPHA7Q15375 998 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 EXOC3L4Q17RC7 722 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 CFAP221Q4G0U5 840 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 MEI1Q5TIA1 1274 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 STYK1Q6J9G0 422 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 RINT1Q6NUQ1 792 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 ACER1Q8TDN7 264 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 SLC35C1Q96A29 364 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 SPAG5Q96R06 1193 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 SIX2Q9NPC8 291 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 STK24Q9Y6E0 443 aa10.81□□□□□ -0.68
CLIP1-204ENST00000501271 GOLGA6BA6NDN3 693 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 ZBTB39O15060 712 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 CHMP2AO43633 222 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 CFBP00751 764 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 TCERG1LQ5VWI1 586 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 AFAP1L1Q8TED9 768 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 HSD17B14Q9BPX1 270 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 PLSCR1O15162 318 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 SLC16A3O15427 465 aaKnown RBP10.8□□□□□ -0.68
CLIP1-204ENST00000501271 TGFB1I1O43294 461 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 APBA3O96018 575 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 UBXN2AP68543 259 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 CC2D2BQ6DHV5 1058 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 OTOP1Q7RTM1 612 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 DYDC2Q96IM9 177 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 INPP4AQ96PE3 977 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-204ENST00000501271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLIP1-204ENST00000501271 OLFML3Q9NRN5 406 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 GCNT4Q9P109 453 aa10.8□□□□□ -0.68
CLIP1-204ENST00000501271 ZSCAN5CA6NGD5 496 aaPredicted RBP10.79□□□□□ -0.68
CLIP1-204ENST00000501271 TCP10L2B9ZVM9 353 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 PSMD10O75832 226 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 SLITRK3O94933 977 aa10.79□□□□□ -0.68
CLIP1-204ENST00000501271 GLI1P08151 1106 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms