RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 FAM157BP0CG42 384 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 ARP10275 920 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 MAPTP10636 758 aaKnown RBP6.61□□□□□ -1.35
SPTA1-209ENST00000498708 ICA1Q05084 483 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 GABPAQ06546 454 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 CBX2Q14781 532 aaPredicted RBP6.61□□□□□ -1.35
SPTA1-209ENST00000498708 ACAP1Q15027 740 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 TTF1Q15361 905 aaPredicted RBP6.61□□□□□ -1.35
SPTA1-209ENST00000498708 SAMD5Q5TGI4 173 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 ARMCX2Q7L311 632 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 TLK2Q86UE8 772 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 CERS3Q8IU89 383 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 ERC1Q8IUD2 1116 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 CLASRPQ8N2M8 674 aaKnown RBP6.61□□□□□ -1.35
SPTA1-209ENST00000498708 RETREG2Q8NC44 543 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 CHMP4CQ96CF2 233 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 RIPOR3Q96MK2 946 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 CRBNQ96SW2 442 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 NSUN3Q9H649 340 aaKnown RBP6.61□□□□□ -1.35
SPTA1-209ENST00000498708 DCP1AQ9NPI6 582 aaPredicted RBP6.61□□□□□ -1.35
SPTA1-209ENST00000498708 DLL3Q9NYJ7 618 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 NOP53Q9NZM5 478 aaKnown RBP6.61□□□□□ -1.35
SPTA1-209ENST00000498708 MYO10Q9HD67 2058 aa6.61□□□□□ -1.35
SPTA1-209ENST00000498708 NAV1Q8NEY1 1877 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 TCRBV5S4A2TA0A5A2 114 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 KRBA1A5PL33 1030 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 H3BNC9 293 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 PIK3CDO00329 1044 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 KHNYNO15037 678 aaKnown RBP6.6□□□□□ -1.35
SPTA1-209ENST00000498708 IGSF3O75054 1194 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 ITGB2P05107 769 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 EEF2P13639 858 aaKnown RBP6.6□□□□□ -1.35
SPTA1-209ENST00000498708 CDK8P49336 464 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 CNTN2Q02246 1040 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 LAMC2Q13753 1193 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 LINC00114Q6XXX2 140 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.6□□□□□ -1.35
SPTA1-209ENST00000498708 TMEM179Q6ZVK1 233 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 NUP88Q99567 741 aaPredicted RBP6.6□□□□□ -1.35
SPTA1-209ENST00000498708 SEZ6LQ9BYH1 1024 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 AP5M1Q9H0R1 490 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 IGFLR1Q9H665 355 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 VCPKMTQ9H867 229 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 PDGFCQ9NRA1 345 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 PAG1Q9NWQ8 432 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 SCHIP1Q9P0W5 487 aaPredicted RBP6.6□□□□□ -1.35
SPTA1-209ENST00000498708 CD207Q9UJ71 328 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 SLC4A4Q9Y6R1 1079 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 MICAL3Q7RTP6 2002 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 GPR179Q6PRD1 2367 aa6.6□□□□□ -1.35
SPTA1-209ENST00000498708 SCN10AQ9Y5Y9 1956 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 DCDC2BA2VCK2 349 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 USP17L12C9JPN9 530 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 USP17L21D6R901 530 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 SMARCA5O60264 1052 aaPredicted RBP6.59□□□□□ -1.35
SPTA1-209ENST00000498708 ZEB2O60315 1214 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 NBNO60934 754 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 ADAM23O75077 832 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 COL8A1P27658 744 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 ADD2P35612 726 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 HSP90AB4PQ58FF6 505 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 FAM47CQ5HY64 1035 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 FAM83BQ5T0W9 1011 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 MCTP2Q6DN12 878 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 SNRNP48Q6IEG0 339 aaKnown RBP6.59□□□□□ -1.35
SPTA1-209ENST00000498708 TRIM50Q86XT4 487 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 AMOTL1Q8IY63 956 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 KIF1BPQ96EK5 621 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 MSLNLQ96KJ4 702 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 RPGRIP1Q96KN7 1286 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 INCENPQ9NQS7 918 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 SWAP70Q9UH65 585 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 PRR12Q9ULL5 1215 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 ISY1Q9ULR0 285 aaKnown RBP6.59□□□□□ -1.35
SPTA1-209ENST00000498708 TMX2Q9Y320 296 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 INSL6Q9Y581 213 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 PCDHGC5Q9Y5F6 944 aa6.59□□□□□ -1.35
SPTA1-209ENST00000498708 GPC6Q9Y625 555 aaPredicted RBP6.59□□□□□ -1.35
SPTA1-209ENST00000498708 SPEGQ15772 3267 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 MINDY4BA8MYZ0 360 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 WDR46O15213 610 aaKnown RBP6.58□□□□□ -1.36
SPTA1-209ENST00000498708 NCK2O43639 380 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 CSPG5O95196 566 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 EYA4O95677 639 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 MYL3P08590 195 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 HOXB4P17483 251 aaPredicted RBP6.58□□□□□ -1.36
SPTA1-209ENST00000498708 CD33P20138 364 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 ICAM3P32942 547 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 DGKGP49619 791 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 RRP1P56182 461 aaKnown RBP6.58□□□□□ -1.36
SPTA1-209ENST00000498708 HTRA4P83105 476 aaPredicted RBP6.58□□□□□ -1.36
SPTA1-209ENST00000498708 PURAQ00577 322 aaKnown RBP6.58□□□□□ -1.36
SPTA1-209ENST00000498708 ADAM15Q13444 863 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 NCOA4Q13772 614 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 TEAD4Q15561 434 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 PTPN21Q16825 1174 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 RSPO4Q2I0M5 234 aaPredicted RBP6.58□□□□□ -1.36
SPTA1-209ENST00000498708 C12orf60Q5U649 245 aa6.58□□□□□ -1.36
SPTA1-209ENST00000498708 ZNF468Q5VIY5 522 aaPredicted RBP6.58□□□□□ -1.36
SPTA1-209ENST00000498708 TAPT1Q6NXT6 567 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms