RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 MARCH6O60337 910 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 CCNT1O60563 726 aaKnown RBP11.87□□□□□ -0.51
FXR1-222ENST00000498658 TDP2O95551 362 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 KCNJ6P48051 423 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 NUBP1P53384 320 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 IKBKEQ14164 716 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 ZNF484Q5JVG2 852 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 FAM26DQ5JW98 314 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 IER5Q5VY09 327 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 FAM43BQ6ZT52 329 aaPredicted RBP11.87□□□□□ -0.51
FXR1-222ENST00000498658 CCDC60Q8IWA6 550 aaPredicted RBP11.87□□□□□ -0.51
FXR1-222ENST00000498658 CKAP2LQ8IYA6 745 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 NME8Q8N427 588 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 BBXQ8WY36 941 aaPredicted RBP11.87□□□□□ -0.51
FXR1-222ENST00000498658 C8orf76Q96K31 380 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 TBC1D32Q96NH3 1257 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 DISC1Q9NRI5 854 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 MSRAQ9UJ68 235 aa11.87□□□□□ -0.51
FXR1-222ENST00000498658 SMIM35A0A1B0GVV1 85 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 KIF28PB7ZC32 967 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 M0QZ92 97 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 EDIL3O43854 480 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 DKC1O60832 514 aaKnown RBP eCLIP11.86□□□□□ -0.51
FXR1-222ENST00000498658 PSMD10O75832 226 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 BAG4O95429 457 aaKnown RBP11.86□□□□□ -0.51
FXR1-222ENST00000498658 ATP2A2P16615 1042 aaKnown RBP11.86□□□□□ -0.51
FXR1-222ENST00000498658 IGBP1P78318 339 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 KRT40Q6A162 431 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 DIS3L2Q8IYB7 885 aaKnown RBP11.86□□□□□ -0.51
FXR1-222ENST00000498658 SLFN12Q8IYM2 578 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 OXER1Q8TDS5 423 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 APBB2Q92870 758 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 WNT8BQ93098 351 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 VWCEQ96DN2 955 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 NRBP2Q9NSY0 501 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 CXXC1Q9P0U4 656 aaPredicted RBP11.86□□□□□ -0.51
FXR1-222ENST00000498658 GABBR1Q9UBS5 961 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 PCDHA2Q9Y5H9 948 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 MYH9P35579 1960 aaKnown RBP11.86□□□□□ -0.51
FXR1-222ENST00000498658 SCN5AQ14524 2016 aa11.86□□□□□ -0.51
FXR1-222ENST00000498658 BTBD18B2RXH4 712 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 MAGEB2O15479 319 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 NBNO60934 754 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 DNAJB2P25686 324 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 ST3GAL1Q11201 340 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 NR5A1Q13285 461 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 MARCH8Q5T0T0 291 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 MIER3Q7Z3K6 550 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 ZNF710Q8N1W2 664 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 USP38Q8NB14 1042 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 ETNPPLQ8TBG4 499 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 SEPT8Q92599 483 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 TIFAQ96CG3 184 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 FOXP1Q9H334 677 aaPredicted RBP11.85□□□□□ -0.51
FXR1-222ENST00000498658 KCNMB3Q9NPA1 279 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 PCDHA11Q9Y5I1 949 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 SQORQ9Y6N5 450 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 IGSF9BQ9UPX0 1349 aa11.85□□□□□ -0.51
FXR1-222ENST00000498658 CHMP2AO43633 222 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 CTSHP09668 335 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 KLRC1P26715 233 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 PPP2R5CQ13362 524 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 ORC2Q13416 577 aaPredicted RBP11.84□□□□□ -0.51
FXR1-222ENST00000498658 GNL2Q13823 731 aaKnown RBP11.84□□□□□ -0.51
FXR1-222ENST00000498658 GSE1Q14687 1217 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 GPNMBQ14956 572 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 PLEKHG4Q58EX7 1191 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 MTHFD1LQ6UB35 978 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 FBXO18Q8NFZ0 1043 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 DNAJB3Q8WWF6 145 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 TNFRSF25Q93038 417 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 UIMC1Q96RL1 719 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 PBX4Q9BYU1 374 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 BACH2Q9BYV9 841 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 UNC45AQ9H3U1 944 aa11.84□□□□□ -0.51
FXR1-222ENST00000498658 TET1Q8NFU7 2136 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 SLC37A4O43826 429 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 CHRNA1P02708 482 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 AMHP03971 560 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 OATP04181 439 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 TMOD1P28289 359 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 MRPS6P82932 125 aaKnown RBP11.83□□□□□ -0.52
FXR1-222ENST00000498658 MBTPS1Q14703 1052 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 XKR3Q5GH77 459 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 ODR4Q5SWX8 454 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 B3GNT9Q6UX72 402 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 RUFY4Q6ZNE9 571 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 HERC6Q8IVU3 1022 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 TMX3Q96JJ7 454 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 FAM49AQ9H0Q0 323 aaPredicted RBP11.83□□□□□ -0.52
FXR1-222ENST00000498658 SEMA6BQ9H3T3 888 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 SLC28A3Q9HAS3 691 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 MTMR10Q9NXD2 777 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.83□□□□□ -0.52
FXR1-222ENST00000498658 GTF3C3Q9Y5Q9 886 aa11.83□□□□□ -0.52
FXR1-222ENST00000498658 GRXCR1A8MXD5 290 aa11.82□□□□□ -0.52
FXR1-222ENST00000498658 NEMFO60524 1076 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms