RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 MICAL1Q8TDZ2 1067 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 DNAJB3Q8WWF6 145 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 ATOH1Q92858 354 aaPredicted RBP13.81□□□□□ -0.2
THBS3-209ENST00000498500 PHF7Q9BWX1 381 aaPredicted RBP13.81□□□□□ -0.2
THBS3-209ENST00000498500 SPZ1Q9BXG8 430 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 IRF2BPLQ9H1B7 796 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 TUBE1Q9UJT0 475 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 CFAP54Q96N23 3096 aa13.81□□□□□ -0.2
THBS3-209ENST00000498500 MYO10Q9HD67 2058 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 PNMA6FA0A0J9YX94 578 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 CCDC69A6NI79 296 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 PPFIA3O75145 1194 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 REC8O95072 547 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 STAG3L1P0CL83 205 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 CPA1P15085 419 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 MARK3P27448 753 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 CD52P31358 61 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 TCF7P36402 384 aaPredicted RBP13.8□□□□□ -0.2
THBS3-209ENST00000498500 VCPP55072 806 aaKnown RBP13.8□□□□□ -0.2
THBS3-209ENST00000498500 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
THBS3-209ENST00000498500 KRT32Q14532 448 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 GRIK4Q16099 956 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 APOA5Q6Q788 366 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 NFXL1Q6ZNB6 911 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 DHX32Q7L7V1 743 aaKnown RBP13.8□□□□□ -0.2
THBS3-209ENST00000498500 NLRX1Q86UT6 975 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 GIMAP8Q8ND71 665 aaPredicted RBP13.8□□□□□ -0.2
THBS3-209ENST00000498500 SENP7Q9BQF6 1050 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 TLE6Q9H808 572 aa13.8□□□□□ -0.2
THBS3-209ENST00000498500 FNDC1Q4ZHG4 1894 aaPredicted RBP13.8□□□□□ -0.2
THBS3-209ENST00000498500 PLXNA3P51805 1871 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 GLP2RO95838 553 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 IBSPP21815 317 aaPredicted RBP13.79□□□□□ -0.2
THBS3-209ENST00000498500 AVPR2P30518 371 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 IGBP1P78318 339 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 MRPS6P82932 125 aaKnown RBP13.79□□□□□ -0.2
THBS3-209ENST00000498500 TMTC3Q6ZXV5 915 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 RTN4RL1Q86UN2 441 aaPredicted RBP13.79□□□□□ -0.2
THBS3-209ENST00000498500 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 NPAS4Q8IUM7 802 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 TMTC2Q8N394 836 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 SRBD1Q8N5C6 995 aaKnown RBP13.79□□□□□ -0.2
THBS3-209ENST00000498500 CTCFLQ8NI51 663 aaPredicted RBP13.79□□□□□ -0.2
THBS3-209ENST00000498500 SMARCC2Q8TAQ2 1214 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 LINC01599Q8WXQ3 324 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 GLG1Q92896 1179 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 CUL5Q93034 780 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 FTHL17Q9BXU8 183 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 FAM49AQ9H0Q0 323 aaPredicted RBP13.79□□□□□ -0.2
THBS3-209ENST00000498500 AGO3Q9H9G7 860 aaKnown RBP13.79□□□□□ -0.2
THBS3-209ENST00000498500 ERAP1Q9NZ08 941 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 BRPF3Q9ULD4 1205 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 LRFN2Q9ULH4 789 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 PCDHGC5Q9Y5F6 944 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 FRMPD4Q14CM0 1322 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 NID2Q14112 1375 aa13.79□□□□□ -0.2
THBS3-209ENST00000498500 M0QZ92 97 aa13.78□□□□□ -0.2
THBS3-209ENST00000498500 PER2O15055 1255 aa13.78□□□□□ -0.2
THBS3-209ENST00000498500 EPB41L2O43491 1005 aaKnown RBP13.78□□□□□ -0.2
THBS3-209ENST00000498500 SMARCA1P28370 1054 aa13.78□□□□□ -0.2
THBS3-209ENST00000498500 KIF5BP33176 963 aa13.78□□□□□ -0.2
THBS3-209ENST00000498500 SPOUT1Q5T280 376 aaKnown RBP13.78□□□□□ -0.2
THBS3-209ENST00000498500 IER5Q5VY09 327 aa13.78□□□□□ -0.2
THBS3-209ENST00000498500 PCNX4Q63HM2 1172 aa13.78□□□□□ -0.2
THBS3-209ENST00000498500 ZBTB33Q86T24 672 aa13.78□□□□□ -0.2
THBS3-209ENST00000498500 SEPT1Q8WYJ6 367 aa13.78□□□□□ -0.2
THBS3-209ENST00000498500 JAKMIP1Q96N16 626 aaKnown RBP13.78□□□□□ -0.2
THBS3-209ENST00000498500 SLC12A7Q9Y666 1083 aa13.78□□□□□ -0.2
THBS3-209ENST00000498500 MBLAC1A4D2B0 266 aaPredicted RBP13.77□□□□□ -0.21
THBS3-209ENST00000498500 H0Y858 1186 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 RPLP2P05387 115 aaKnown RBP13.77□□□□□ -0.21
THBS3-209ENST00000498500 CALM1P0DP23 149 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 CALM2P0DP24 149 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 CALM3P0DP25 149 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 SCG2P13521 617 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 ATF7P17544 494 aaPredicted RBP13.77□□□□□ -0.21
THBS3-209ENST00000498500 GATMP50440 423 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 TMEM62Q0P6H9 643 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 PAK2Q13177 524 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 MARCH8Q5T0T0 291 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 XRRA1Q6P2D8 792 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.21
THBS3-209ENST00000498500 CRIPAKQ8N1N5 446 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 ASIC4Q96FT7 647 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 SMARCAD1Q9H4L7 1026 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 TLR9Q9NR96 1032 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 PADI3Q9ULW8 664 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 PCDHB12Q9Y5F1 795 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 SQORQ9Y6N5 450 aa13.77□□□□□ -0.21
THBS3-209ENST00000498500 EVPLQ92817 2033 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 GSTTP1A0A1W2PQM5 241 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 RRN3P2A6NIE6 340 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 ATP9AO75110 1047 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 HMGB1P09429 215 aaKnown RBP13.76□□□□□ -0.21
THBS3-209ENST00000498500 RPS6KB1P23443 525 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 GNAQP50148 359 aa13.76□□□□□ -0.21
THBS3-209ENST00000498500 RBM10P98175 930 aaKnown RBP13.76□□□□□ -0.21
THBS3-209ENST00000498500 FOXK2Q01167 660 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms