RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 NSMFQ6X4W1 530 aa3.91□□□□□ -1.78
RBM39-242ENST00000498280 ZNF808Q8N4W9 903 aaPredicted RBP3.91□□□□□ -1.78
RBM39-242ENST00000498280 IL17DQ8TAD2 202 aa3.91□□□□□ -1.78
RBM39-242ENST00000498280 CFHR4Q92496 578 aa3.91□□□□□ -1.78
RBM39-242ENST00000498280 TINF2Q9BSI4 451 aa3.91□□□□□ -1.78
RBM39-242ENST00000498280 AARSD1Q9BTE6 412 aaKnown RBP3.91□□□□□ -1.78
RBM39-242ENST00000498280 CARD11Q9BXL7 1154 aa3.91□□□□□ -1.78
RBM39-242ENST00000498280 EPN3Q9H201 632 aa3.91□□□□□ -1.78
RBM39-242ENST00000498280 OAZ3Q9UMX2 235 aa3.91□□□□□ -1.78
RBM39-242ENST00000498280 AGRPO00253 132 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 KLF4O43474 513 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 FGFR1P11362 822 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 PDE6AP16499 860 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 CR2P20023 1033 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 POLD1P28340 1107 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 DNAJA1P31689 397 aaKnown RBP3.9□□□□□ -1.79
RBM39-242ENST00000498280 SEC23AQ15436 765 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 DDR2Q16832 855 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 FNDC7Q5VTL7 733 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 BTBD8Q5XKL5 378 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 FSTL4Q6MZW2 842 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 MAMDC4Q6UXC1 1216 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 ANKS3Q6ZW76 656 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 OSTM1Q86WC4 334 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 IFNL3Q8IZI9 196 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 OR14A2Q96R54 314 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 PLA2G12BQ9BX93 195 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 AURKAIP1Q9NWT8 199 aaPredicted RBP3.9□□□□□ -1.79
RBM39-242ENST00000498280 CDC42EP3Q9UKI2 254 aa3.9□□□□□ -1.79
RBM39-242ENST00000498280 MAN2B1O00754 1011 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 U2SURPO15042 1029 aaKnown RBP3.89□□□□□ -1.79
RBM39-242ENST00000498280 CDC14BO60729 498 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 PTPN1P18031 435 aaKnown RBP3.89□□□□□ -1.79
RBM39-242ENST00000498280 KCNQ1P51787 676 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 JAM2P57087 298 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 IL13RA1P78552 427 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 FOXL1Q12952 345 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 ZMAT1Q5H9K5 638 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 FOXB2Q5VYV0 432 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 LRSAM1Q6UWE0 723 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 ARHGAP36Q6ZRI8 547 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 VPS37DQ86XT2 251 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 PTRH1Q86Y79 214 aaKnown RBP3.89□□□□□ -1.79
RBM39-242ENST00000498280 SCUBE1Q8IWY4 988 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 PRRX2Q99811 253 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 MMRN2Q9H8L6 949 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 MSL2Q9HCI7 577 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 CBLCQ9ULV8 474 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 PCDHA8Q9Y5H6 950 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 DMRT1Q9Y5R6 373 aa3.89□□□□□ -1.79
RBM39-242ENST00000498280 FAM47E-STBD1D6RA91 191 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 RAMP2O60895 175 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 MPIG6BO95866 241 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 KRT15P19012 456 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 WDR72Q3MJ13 1102 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 TM4SF20Q53R12 229 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 SPATC1Q76KD6 591 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 GPR135Q8IZ08 494 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 PCDH19Q8TAB3 1148 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.88□□□□□ -1.79
RBM39-242ENST00000498280 SGSM3Q96HU1 749 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 AGAP2Q99490 1192 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 AMNQ9BXJ7 453 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 ZDHHC5Q9C0B5 715 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 C12orf65Q9H3J6 166 aaKnown RBP3.88□□□□□ -1.79
RBM39-242ENST00000498280 AGO3Q9H9G7 860 aaKnown RBP3.88□□□□□ -1.79
RBM39-242ENST00000498280 RIC8BQ9NVN3 520 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 SRPK3Q9UPE1 567 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 NR2E1Q9Y466 385 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 NUB1Q9Y5A7 615 aa3.88□□□□□ -1.79
RBM39-242ENST00000498280 CUTAO60888 179 aa3.87□□□□□ -1.79
RBM39-242ENST00000498280 C4BPAP04003 597 aaKnown RBP3.87□□□□□ -1.79
RBM39-242ENST00000498280 SRGAP2CP0DJJ0 459 aa3.87□□□□□ -1.79
RBM39-242ENST00000498280 PYGMP11217 842 aa3.87□□□□□ -1.79
RBM39-242ENST00000498280 MSX2P35548 267 aaPredicted RBP3.87□□□□□ -1.79
RBM39-242ENST00000498280 RPS19P39019 145 aaKnown RBP3.87□□□□□ -1.79
RBM39-242ENST00000498280 ETV4P43268 484 aa3.87□□□□□ -1.79
RBM39-242ENST00000498280 ZC3H6P61129 1189 aaKnown RBP3.87□□□□□ -1.79
RBM39-242ENST00000498280 IFRD2Q12894 506 aaPredicted RBP3.87□□□□□ -1.79
RBM39-242ENST00000498280 ACAP1Q15027 740 aa3.87□□□□□ -1.79
RBM39-242ENST00000498280 LRCH2Q5VUJ6 765 aa3.87□□□□□ -1.79
RBM39-242ENST00000498280 LARP4BQ92615 738 aaKnown RBP3.87□□□□□ -1.79
RBM39-242ENST00000498280 ZFYVE21Q9BQ24 234 aa3.87□□□□□ -1.79
RBM39-242ENST00000498280 BTBD7Q9P203 1132 aa3.87□□□□□ -1.79
RBM39-242ENST00000498280 ARHGAP28Q9P2N2 729 aa3.87□□□□□ -1.79
RBM39-242ENST00000498280 REXO2Q9Y3B8 237 aaKnown RBP3.87□□□□□ -1.79
RBM39-242ENST00000498280 TRAV20A0A0B4J274 112 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 ARHGAP6O43182 974 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 ADCY3O60266 1144 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 C6orf222P0C671 652 aaPredicted RBP3.86□□□□□ -1.79
RBM39-242ENST00000498280 CD83Q01151 205 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 ARID5AQ03989 594 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 PCOLCEQ15113 449 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 FAM209AQ5JX71 171 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 SPTY2D1Q68D10 685 aaPredicted RBP3.86□□□□□ -1.79
RBM39-242ENST00000498280 PCSK4Q6UW60 755 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 ZNF627Q7L945 461 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 OR14K1Q8NGZ2 314 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 TMEM176AQ96HP8 235 aa3.86□□□□□ -1.79
RBM39-242ENST00000498280 TLR9Q9NR96 1032 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms