RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 FBXL18Q96ME1 805 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 FANCD2OSQ96PS1 177 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 NELL2Q99435 816 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 DSCC1Q9BVC3 393 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 ZMAT4Q9H898 229 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 MBIPQ9NS73 344 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 RAD18Q9NS91 495 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 GPATCH2Q9NW75 528 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 CORO2BQ9UQ03 480 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 FRMD4BQ9Y2L6 1034 aa7.16□□□□□ -1.26
BRCA1-224ENST00000497488 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 H0Y8X5 98 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 EIF3FO00303 357 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-224ENST00000497488 DVL2O14641 736 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 TM4SF5O14894 197 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 AREL1O15033 823 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 ENPP1P22413 925 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 MAPK10P53779 464 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 NLRP12P59046 1061 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 POU4F1Q01851 419 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 GRIK5Q16478 980 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 BRINP3Q76B58 766 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 COLGALT2Q8IYK4 626 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 THEMISQ8N1K5 641 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-224ENST00000497488 SLC30A5Q8TAD4 765 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 NUP133Q8WUM0 1156 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 TRAPPC12Q8WVT3 735 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 GTPBP3Q969Y2 492 aaKnown RBP7.15□□□□□ -1.26
BRCA1-224ENST00000497488 ZNF837Q96EG3 531 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-224ENST00000497488 SLC2A13Q96QE2 648 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 TTLL2Q9BWV7 592 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 TMEM120AQ9BXJ8 343 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 DCP1AQ9NPI6 582 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-224ENST00000497488 ITM2CQ9NQX7 267 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 TMEM98Q9Y2Y6 226 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 PCDHGB2Q9Y5G2 931 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 BACE2Q9Y5Z0 518 aa7.15□□□□□ -1.26
BRCA1-224ENST00000497488 SLC12A8A0AV02 714 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 SLC35F4A4IF30 521 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 FAM47E-STBD1D6RA91 191 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 AURKAO14965 403 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 RGS9O75916 674 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-224ENST00000497488 GFPT2O94808 682 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 NCAM1P13591 858 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 RAD52P43351 418 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 STT3AP46977 705 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 ZBED6P86452 979 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 ZNF543Q08ER8 600 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 SUZ12Q15022 739 aaKnown RBP7.14□□□□□ -1.27
BRCA1-224ENST00000497488 SNX17Q15036 470 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 CRY1Q16526 586 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 CDC37Q16543 378 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-224ENST00000497488 FSCN1Q16658 493 aaKnown RBP7.14□□□□□ -1.27
BRCA1-224ENST00000497488 GPATCH4Q5T3I0 446 aaKnown RBP7.14□□□□□ -1.27
BRCA1-224ENST00000497488 SPOCD1Q6ZMY3 1216 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 KCNK18Q7Z418 384 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 ZNF527Q8NB42 609 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 KLHL23Q8NBE8 558 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 RNF141Q8WVD5 230 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 GMCL1Q96IK5 515 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 CGRRF1Q99675 332 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 MDFIQ99750 246 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 QRSL1Q9H0R6 528 aaKnown RBP7.14□□□□□ -1.27
BRCA1-224ENST00000497488 ATXN3LQ9H3M9 355 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 CATSPERZQ9NTU4 200 aa7.14□□□□□ -1.27
BRCA1-224ENST00000497488 IFT80Q9P2H3 777 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-224ENST00000497488 TOP2AP11388 1531 aaKnown RBP7.13□□□□□ -1.27
BRCA1-224ENST00000497488 C2orf71A6NGG8 1288 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 ZNF561-AS1K7EIQ3 104 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 MYF5P13349 255 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 VEGFAP15692 232 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-224ENST00000497488 ELF1P32519 619 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 GRK3P35626 688 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 IRF9Q00978 393 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 TTLL4Q14679 1199 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 STARD3Q14849 445 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 TAF12Q16514 161 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 GPAT2Q6NUI2 795 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 RFX8Q6ZV50 586 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 ARMCX6Q7L4S7 300 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 MAEAQ7L5Y9 396 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 FASTKD5Q7L8L6 764 aaKnown RBP7.13□□□□□ -1.27
BRCA1-224ENST00000497488 CACNA2D3Q8IZS8 1091 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 NKAIN3Q8N8D7 197 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 MFSD2AQ8NA29 543 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 RCBTB1Q8NDN9 531 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 NELL1Q92832 810 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 ISL2Q96A47 359 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 ZNF775Q96BV0 537 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-224ENST00000497488 LTV1Q96GA3 475 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-224ENST00000497488 ZSCAN31Q96LW9 406 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-224ENST00000497488 TRIT1Q9H3H1 467 aaKnown RBP7.13□□□□□ -1.27
BRCA1-224ENST00000497488 PCIF1Q9H4Z3 704 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 PRKRIP1Q9H875 184 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-224ENST00000497488 SENP2Q9HC62 589 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 SMURF1Q9HCE7 757 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 SH3GLB2Q9NR46 395 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 ARHGAP28Q9P2N2 729 aa7.13□□□□□ -1.27
BRCA1-224ENST00000497488 GRHPRQ9UBQ7 328 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms