RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ESRP1Q6NXG1 681 aaKnown RBP6.6□□□□□ -1.35
VPS36-206ENST00000497149 LIPIQ6XZB0 460 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 HDGFL2Q7Z4V5 671 aaPredicted RBP6.6□□□□□ -1.35
VPS36-206ENST00000497149 ZZZ3Q8IYH5 903 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 ZNF610Q8N9Z0 462 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 SMARCC2Q8TAQ2 1214 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 COG1Q8WTW3 980 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 SYT3Q9BQG1 590 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 PUS7LQ9H0K6 701 aaKnown RBP6.6□□□□□ -1.35
VPS36-206ENST00000497149 PCDH18Q9HCL0 1135 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 TYW1Q9NV66 732 aaKnown RBP6.6□□□□□ -1.35
VPS36-206ENST00000497149 ARHGAP28Q9P2N2 729 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 FAN1Q9Y2M0 1017 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 ASB1Q9Y576 335 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 ETV2O00321 342 aaPredicted RBP6.59□□□□□ -1.35
VPS36-206ENST00000497149 FOXO4P98177 505 aa6.59□□□□□ -1.35
VPS36-206ENST00000497149 BRDTQ58F21 947 aaPredicted RBP6.59□□□□□ -1.35
VPS36-206ENST00000497149 VASNQ6EMK4 673 aa6.59□□□□□ -1.35
VPS36-206ENST00000497149 TMC5Q6UXY8 1006 aa6.59□□□□□ -1.35
VPS36-206ENST00000497149 FERMT3Q86UX7 667 aa6.59□□□□□ -1.35
VPS36-206ENST00000497149 RASSF3Q86WH2 238 aa6.59□□□□□ -1.35
VPS36-206ENST00000497149 NME9Q86XW9 330 aa6.59□□□□□ -1.35
VPS36-206ENST00000497149 CLRN3Q8NCR9 226 aa6.59□□□□□ -1.35
VPS36-206ENST00000497149 HIPK4Q8NE63 616 aa6.59□□□□□ -1.35
VPS36-206ENST00000497149 ERCC4Q92889 916 aaPredicted RBP6.59□□□□□ -1.35
VPS36-206ENST00000497149 FOXRED1Q96CU9 486 aaPredicted RBP6.59□□□□□ -1.35
VPS36-206ENST00000497149 SLC39A2Q9NP94 309 aa6.59□□□□□ -1.35
VPS36-206ENST00000497149 PRAMEF22A3QJZ6 481 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 ZNF839A8K0R7 811 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 KATNA1O75449 491 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 PRKD3O94806 890 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 PDGFRBP09619 1106 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 PTGS1P23219 599 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 CD40P25942 277 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 THBS2P35442 1172 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 ADCY1Q08828 1119 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 PRAMEF18Q5VWM3 479 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 OGFOD2Q6N063 350 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 SYDE1Q6ZW31 735 aaPredicted RBP6.58□□□□□ -1.36
VPS36-206ENST00000497149 RTN4RL1Q86UN2 441 aaPredicted RBP6.58□□□□□ -1.36
VPS36-206ENST00000497149 CILP2Q8IUL8 1156 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 CNTD1Q8N815 330 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 IGDCC4Q8TDY8 1250 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 RTF1Q92541 710 aaKnown RBP6.58□□□□□ -1.36
VPS36-206ENST00000497149 FAM84AQ96KN4 292 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 GORASP1Q9BQQ3 440 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 TRIM8Q9BZR9 551 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 VTA1Q9NP79 307 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 UCKL1Q9NWZ5 548 aa6.58□□□□□ -1.36
VPS36-206ENST00000497149 NOC2LQ9Y3T9 749 aaKnown RBP6.58□□□□□ -1.36
VPS36-206ENST00000497149 NFIBO00712 420 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 RAB11FIP3O75154 756 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 TMEM253P0C7T8 217 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 HSP90B1P14625 803 aaKnown RBP6.57□□□□□ -1.36
VPS36-206ENST00000497149 GLDCP23378 1020 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 MC4RP32245 332 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 ITGA1P56199 1179 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 EXOSC10Q01780 885 aaKnown RBP6.57□□□□□ -1.36
VPS36-206ENST00000497149 ITKQ08881 620 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 MTMR1Q13613 665 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 FRMD7Q6ZUT3 714 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 STK32CQ86UX6 486 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 TMEFF1Q8IYR6 380 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 DTX3Q8N9I9 347 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 E2F7Q96AV8 911 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 ZNF496Q96IT1 587 aaPredicted RBP6.57□□□□□ -1.36
VPS36-206ENST00000497149 NOX5Q96PH1 765 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 TMEM209Q96SK2 561 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 C11orf84Q9BUA3 381 aaPredicted RBP6.57□□□□□ -1.36
VPS36-206ENST00000497149 ZDHHC5Q9C0B5 715 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 MS4A5Q9H3V2 200 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 INCENPQ9NQS7 918 aa6.57□□□□□ -1.36
VPS36-206ENST00000497149 FARP2O94887 1054 aaPredicted RBP6.56□□□□□ -1.36
VPS36-206ENST00000497149 MPIG6BO95866 241 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 MED14OSP0DP75 135 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 LIMS1P48059 325 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 ADAM9Q13443 819 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 FZD5Q13467 585 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 SKIDA1Q1XH10 827 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 LINC00482Q8N8I6 264 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 AHCYL2Q96HN2 611 aaKnown RBP6.56□□□□□ -1.36
VPS36-206ENST00000497149 SIGLEC10Q96LC7 697 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 AMNQ9BXJ7 453 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 CCDC8Q9H0W5 538 aaPredicted RBP6.56□□□□□ -1.36
VPS36-206ENST00000497149 DLL4Q9NR61 685 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 TOPORSQ9NS56 1045 aaPredicted RBP6.56□□□□□ -1.36
VPS36-206ENST00000497149 GALNT8Q9NY28 637 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 MSRAQ9UJ68 235 aa6.56□□□□□ -1.36
VPS36-206ENST00000497149 UBA6A0AVT1 1052 aaPredicted RBP6.55□□□□□ -1.36
VPS36-206ENST00000497149 LCHNA4D1U4 455 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 K7ESF4 209 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 HMGB1P09429 215 aaKnown RBP6.55□□□□□ -1.36
VPS36-206ENST00000497149 TTC38Q5R3I4 469 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 PHYKPLQ8IUZ5 450 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 KYQ8NBH2 561 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 MAML3Q96JK9 1138 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 TUBGCP5Q96RT8 1024 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 FOXB1Q99853 325 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 MENTQ9BUN1 341 aa6.55□□□□□ -1.36
VPS36-206ENST00000497149 USP36Q9P275 1121 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms