RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 FBXO27Q8NI29 283 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 VTI1AQ96AJ9 217 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 TMEM39BQ9GZU3 492 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 CCDC8Q9H0W5 538 aaPredicted RBP3.7□□□□□ -1.82
SHTN1-206ENST00000497044 RASSF4Q9H2L5 321 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 TDRD3Q9H7E2 651 aaKnown RBP3.7□□□□□ -1.82
SHTN1-206ENST00000497044 MARK1Q9P0L2 795 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 STK39Q9UEW8 545 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 ADAM30Q9UKF2 790 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 H3BM21 787 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 SUPT20HL2P0C7V6 817 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 ACTN1P12814 892 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 AKR1A1P14550 325 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 FGFR3P22607 806 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 LRRC41Q15345 812 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 TRIM61Q5EBN2 209 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 TMEM184AQ6ZMB5 413 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 RPAINQ86UA6 219 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 VPS37DQ86XT2 251 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 VEZTQ9HBM0 779 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 PDE4DIPQ5VU43 2346 aa3.7□□□□□ -1.82
SHTN1-206ENST00000497044 CLRN2A0PK11 232 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 TRIM75PA6NK02 468 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 ARVCFO00192 962 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 C2orf27AQ580R0 203 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 FAM214BQ7L5A3 538 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 PRICKLE2Q7Z3G6 844 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 CDCA3Q99618 268 aaPredicted RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 POLMQ9NP87 494 aaPredicted RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 NOP58Q9Y2X3 529 aaKnown RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 LRRFIP2Q9Y608 721 aaKnown RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 MTCH2Q9Y6C9 303 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 SQORQ9Y6N5 450 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 ZMYM2Q9UBW7 1377 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 A0A1W2PQH9 124 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 TRIM43BA6NCK2 446 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 WDR46O15213 610 aaKnown RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 RAB11FIP3O75154 756 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 NBPF7P0C2Y1 421 aaPredicted RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 TRIM27P14373 513 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 NID1P14543 1247 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 ARNTP27540 789 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 ATP8B2P98198 1209 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 NHLH1Q02575 133 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 SPEM2Q0P670 501 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 NFX1Q12986 1120 aaKnown RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 G3BP1Q13283 466 aaKnown RBP eCLIP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 LINC00114Q6XXX2 140 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 FAM126BQ8IXS8 530 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 CHST13Q8NET6 341 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 DIS3LQ8TF46 1054 aaKnown RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 TRIM43Q96BQ3 446 aaPredicted RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 KAZALD1Q96I82 304 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 CCDC17Q96LX7 622 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 PLVAPQ9BX97 442 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 NUCKS1Q9H1E3 243 aaKnown RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 CNNM2Q9H8M5 875 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 INPP5FQ9Y2H2 1132 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 EMSYQ7Z589 1322 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 SMIM22K7EJ46 135 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 TCERG1O14776 1098 aaKnown RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 ZNF865P0CJ78 1059 aaPredicted RBP3.69□□□□□ -1.82
SHTN1-206ENST00000497044 EPB42P16452 691 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 PCSK2P16519 638 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 ATP2B3Q16720 1220 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 NFRKBQ6P4R8 1299 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 ADHFE1Q8IWW8 467 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 CAGE1Q8TC20 777 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 SSH3Q8TE77 659 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 KIFC2Q96AC6 838 aa3.69□□□□□ -1.82
SHTN1-206ENST00000497044 KIAA1217Q5T5P2 1943 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 MICAL3Q7RTP6 2002 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 PDE2AO00408 941 aaPredicted RBP3.68□□□□□ -1.82
SHTN1-206ENST00000497044 NOVP48745 357 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 MRE11P49959 708 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 RRP1P56182 461 aaKnown RBP3.68□□□□□ -1.82
SHTN1-206ENST00000497044 HTRA4P83105 476 aaPredicted RBP3.68□□□□□ -1.82
SHTN1-206ENST00000497044 RPL6Q02878 288 aaKnown RBP3.68□□□□□ -1.82
SHTN1-206ENST00000497044 HYAL2Q12891 473 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 CCDC96Q2M329 555 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 PERM1Q5SV97 790 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 SEZ6L2Q6UXD5 910 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 TRPV1Q8NER1 839 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 REPS2Q8NFH8 660 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 ST13P5Q8NFI4 369 aaPredicted RBP3.68□□□□□ -1.82
SHTN1-206ENST00000497044 MYLIPQ8WY64 445 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 BSNDQ8WZ55 320 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 RCAN3Q9UKA8 241 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 FAM184BQ9ULE4 1060 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 TMEM8BA6NDV4 472 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 LOC730098B7Z3J9 87 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 K7ESF4 209 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 DLGAP3O95886 979 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 POU2F2P09086 479 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 SNRPBP14678 240 aaKnown RBP3.68□□□□□ -1.82
SHTN1-206ENST00000497044 COASYQ13057 564 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 DLK2Q6UY11 383 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 FAM178BQ8IXR5 827 aa3.68□□□□□ -1.82
SHTN1-206ENST00000497044 ABHD17AQ96GS6 310 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms