RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 TTC38Q5R3I4 469 aa21.66■■□□□ 1.06
CTDSP1-213ENST00000496785 RPAINQ86UA6 219 aa21.66■■□□□ 1.06
CTDSP1-213ENST00000496785 HAS1Q92839 578 aa21.66■■□□□ 1.06
CTDSP1-213ENST00000496785 GJA10Q969M2 543 aa21.66■■□□□ 1.06
CTDSP1-213ENST00000496785 PCDHA12Q9UN75 941 aa21.66■■□□□ 1.06
CTDSP1-213ENST00000496785 MCM7P33993 719 aa21.65■■□□□ 1.06
CTDSP1-213ENST00000496785 EPHB4P54760 987 aa21.65■■□□□ 1.06
CTDSP1-213ENST00000496785 TMEM240Q5SV17 173 aa21.65■■□□□ 1.06
CTDSP1-213ENST00000496785 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.65■■□□□ 1.062e-13■■□□□ 11.6
CTDSP1-213ENST00000496785 VAV3Q9UKW4 847 aa21.65■■□□□ 1.06
CTDSP1-213ENST00000496785 RSPH10B2B2RC85 870 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 OATP04181 439 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 RSPH10BP0C881 870 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 PSMC5P62195 406 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 PRKCEQ02156 737 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 RILPL1Q5EBL4 403 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 C9orf50Q5SZB4 431 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 ZNF618Q5T7W0 954 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 ZNF365Q70YC5 407 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 DEFB128Q7Z7B8 93 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 FTOQ9C0B1 505 aaKnown RBP eCLIP21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 PCDHA2Q9Y5H9 948 aa21.64■■□□□ 1.05
CTDSP1-213ENST00000496785 MYH9P35579 1960 aaKnown RBP21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 KIF28PB7ZC32 967 aa21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 M0QZ92 97 aa21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 ACRP10323 421 aa21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 EPHA7Q15375 998 aa21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 XKR3Q5GH77 459 aa21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 MARCH8Q5T0T0 291 aa21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 NCAPH2Q6IBW4 605 aa21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 NEK9Q8TD19 979 aa21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 HERVK_113Q902F9 699 aa21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 WNT8BQ93098 351 aa21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 TTC12Q9H892 705 aaPredicted RBP21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 TRIP12Q14669 1992 aaPredicted RBP21.63■■□□□ 1.05
CTDSP1-213ENST00000496785 SMIM35A0A1B0GVV1 85 aa21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 MAGEB2O15479 319 aa21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 P4HBP07237 508 aaKnown RBP21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 OR52Z1P0C646 297 aa21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 ATP4AP20648 1035 aa21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 KLRC1P26715 233 aa21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 TXKP42681 527 aa21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 QARSP47897 775 aaKnown RBP21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 MTHFD1LQ6UB35 978 aa21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 C16orf59Q7L2K0 433 aa21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 NME8Q8N427 588 aa21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 MTMR9Q96QG7 549 aa21.62■■□□□ 1.05
CTDSP1-213ENST00000496785 ZNF862O60290 1169 aa21.61■■□□□ 1.05
CTDSP1-213ENST00000496785 BAIAP3O94812 1187 aa21.61■■□□□ 1.05
CTDSP1-213ENST00000496785 CXCL10P02778 98 aa21.61■■□□□ 1.05
CTDSP1-213ENST00000496785 HSP90AA1P07900 732 aaKnown RBP21.61■■□□□ 1.05
CTDSP1-213ENST00000496785 ZNF174Q15697 407 aa21.61■■□□□ 1.05
CTDSP1-213ENST00000496785 TMEM266Q2M3C6 531 aa21.61■■□□□ 1.05
CTDSP1-213ENST00000496785 FAM26DQ5JW98 314 aa21.61■■□□□ 1.05
CTDSP1-213ENST00000496785 IER5Q5VY09 327 aa21.61■■□□□ 1.05
CTDSP1-213ENST00000496785 TRIOBPQ9H2D6 2365 aa21.61■■□□□ 1.05
CTDSP1-213ENST00000496785 EML1O00423 815 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 LAD1O00515 517 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 WNT7AO00755 349 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 EFCAB14O75071 495 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 CTSHP09668 335 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 TMOD1P28289 359 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 SPIRE1Q08AE8 756 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 UGCGQ16739 394 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 CNKSR3Q6P9H4 555 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 TRAF7Q6Q0C0 670 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 RUFY4Q6ZNE9 571 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 TRMT1LQ7Z2T5 733 aaKnown RBP21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 BRAPQ7Z569 592 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 TRAPPC12Q8WVT3 735 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 DNAJB3Q8WWF6 145 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 SEPT9Q9UHD8 586 aaPredicted RBP21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 PPME1Q9Y570 386 aa21.6■■□□□ 1.05
CTDSP1-213ENST00000496785 VPS37CA5D8V6 355 aaPredicted RBP21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 ZBBXA8MT70 800 aa21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 PDIA4P13667 645 aaKnown RBP21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 FXR1P51114 621 aaKnown RBP eCLIP21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 RASIP1Q5U651 963 aa21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 OTOP2Q7RTS6 562 aa21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 EXOC8Q8IYI6 725 aa21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 ZNF710Q8N1W2 664 aa21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 BANK1Q8NDB2 785 aa21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 ERMNQ8TAM6 284 aa21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 JPH2Q9BR39 696 aaPredicted RBP21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 NIFKQ9BYG3 293 aaKnown RBP21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 RAB34Q9BZG1 259 aa21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 FAM49AQ9H0Q0 323 aaPredicted RBP21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 TMEM60Q9H2L4 133 aa21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 ZSWIM4Q9H7M6 989 aa21.59■■□□□ 1.05
CTDSP1-213ENST00000496785 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.58■■□□□ 1.05
CTDSP1-213ENST00000496785 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.58■■□□□ 1.05
CTDSP1-213ENST00000496785 NBNO60934 754 aa21.58■■□□□ 1.05
CTDSP1-213ENST00000496785 C22orf31O95567 290 aa21.58■■□□□ 1.05
CTDSP1-213ENST00000496785 MRPS6P82932 125 aaKnown RBP21.58■■□□□ 1.05
CTDSP1-213ENST00000496785 SMAD3P84022 425 aaKnown RBP21.58■■□□□ 1.05
CTDSP1-213ENST00000496785 TBC1D8BQ0IIM8 1120 aa21.58■■□□□ 1.05
CTDSP1-213ENST00000496785 GPR153Q6NV75 609 aa21.58■■□□□ 1.05
CTDSP1-213ENST00000496785 OTUD6AQ7L8S5 288 aa21.58■■□□□ 1.05
CTDSP1-213ENST00000496785 C4orf19Q8IY42 314 aa21.58■■□□□ 1.05
CTDSP1-213ENST00000496785 LXNQ9BS40 222 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms