RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 LOXHD1Q8IVV2 1947 aa20.54■□□□□ 0.88
TSSC4-210ENST00000496468 KIAA0100Q14667 2235 aaKnown RBP20.54■□□□□ 0.88
TSSC4-210ENST00000496468 A0A0U1RQG5 324 aaPredicted RBP20.53■□□□□ 0.88
TSSC4-210ENST00000496468 CCDC85CA6NKD9 419 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 HAS3O00219 553 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 SLITRK3O94933 977 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 SPATA31C1P0DKV0 1188 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 EN2P19622 333 aaPredicted RBP20.53■□□□□ 0.88
TSSC4-210ENST00000496468 MUTP22033 750 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 SOX10P56693 466 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 PLCB4Q15147 1175 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 SHC4Q6S5L8 630 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 C4orf19Q8IY42 314 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 CALML4Q96GE6 196 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 CCSER1Q9C0I3 900 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 NT5C3AQ9H0P0 336 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 C11orf49Q9H6J7 331 aa20.53■□□□□ 0.88
TSSC4-210ENST00000496468 GOLGA6L4A6NEF3 574 aa20.52■□□□□ 0.88
TSSC4-210ENST00000496468 LYPLA2O95372 231 aa20.52■□□□□ 0.88
TSSC4-210ENST00000496468 KARSQ15046 597 aaKnown RBP20.52■□□□□ 0.88
TSSC4-210ENST00000496468 XKR3Q5GH77 459 aa20.52■□□□□ 0.88
TSSC4-210ENST00000496468 HYIQ5T013 277 aa20.52■□□□□ 0.88
TSSC4-210ENST00000496468 RESP18Q5W5W9 173 aa20.52■□□□□ 0.88
TSSC4-210ENST00000496468 ADALQ6DHV7 355 aa20.52■□□□□ 0.88
TSSC4-210ENST00000496468 USP49Q70CQ1 688 aa20.52■□□□□ 0.88
TSSC4-210ENST00000496468 TRMT1LQ7Z2T5 733 aaKnown RBP20.52■□□□□ 0.88
TSSC4-210ENST00000496468 BBXQ8WY36 941 aaPredicted RBP20.52■□□□□ 0.88
TSSC4-210ENST00000496468 CCDC43Q96MW1 224 aaKnown RBP20.52■□□□□ 0.88
TSSC4-210ENST00000496468 SENP6Q9GZR1 1112 aaPredicted RBP20.52■□□□□ 0.88
TSSC4-210ENST00000496468 DDX19AQ9NUU7 478 aaKnown RBP20.52■□□□□ 0.88
TSSC4-210ENST00000496468 FAM13BQ9NYF5 915 aa20.52■□□□□ 0.88
TSSC4-210ENST00000496468 CCDC39Q9UFE4 941 aa20.52■□□□□ 0.88
TSSC4-210ENST00000496468 A0A1W2PQ27 194 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 A0A1W2PQ64 194 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 A0A1W2PQD8 194 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 SMIM10L2AP0DMW4 78 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 SMIM10L2BP0DMW5 78 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 COL6A1P12109 1028 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 ATP4AP20648 1035 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 YWHABP31946 246 aaKnown RBP20.51■□□□□ 0.87
TSSC4-210ENST00000496468 PPFIA1Q13136 1202 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 ITGA7Q13683 1181 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 NBPF20Q3BBV1 942 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 TPRNQ4KMQ1 711 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 TMEM119Q4V9L6 283 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 FAM47CQ5HY64 1035 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 NECAB2Q7Z6G3 386 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 C7orf31Q8N865 590 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 PAWRQ96IZ0 340 aaKnown RBP20.51■□□□□ 0.87
TSSC4-210ENST00000496468 RNPEPQ9H4A4 650 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 KIAA1024Q9UPX6 916 aa20.51■□□□□ 0.87
TSSC4-210ENST00000496468 COL1A2P08123 1366 aa20.5■□□□□ 0.87
TSSC4-210ENST00000496468 HBP1O60381 514 aa20.5■□□□□ 0.87
TSSC4-210ENST00000496468 PLCG1P19174 1290 aa20.5■□□□□ 0.87
TSSC4-210ENST00000496468 GRB10Q13322 594 aa20.5■□□□□ 0.87
TSSC4-210ENST00000496468 ECM1Q16610 540 aa20.5■□□□□ 0.87
TSSC4-210ENST00000496468 PLA2G4FQ68DD2 849 aa20.5■□□□□ 0.87
TSSC4-210ENST00000496468 NFRKBQ6P4R8 1299 aa20.5■□□□□ 0.87
TSSC4-210ENST00000496468 PPP1R13LQ8WUF5 828 aa20.5■□□□□ 0.87
TSSC4-210ENST00000496468 MRPS27Q92552 414 aaKnown RBP20.5■□□□□ 0.87
TSSC4-210ENST00000496468 PNMA5Q96PV4 448 aa20.5■□□□□ 0.87
TSSC4-210ENST00000496468 NRBP2Q9NSY0 501 aa20.5■□□□□ 0.87
TSSC4-210ENST00000496468 TMEM150BA6NC51 233 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 DDX11L8A8MPP1 907 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 GOLGA6L22H0YM25 854 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 CMA1P23946 247 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 GRIK4Q16099 956 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 CCDC73Q6ZRK6 1079 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 ANO5Q75V66 913 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 OTUD6AQ7L8S5 288 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 FSIP1Q8NA03 581 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 NACC1Q96RE7 527 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 PLIN2Q99541 437 aa20.49■□□□□ 0.87
TSSC4-210ENST00000496468 STBD1O95210 358 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 PFKFB1P16118 471 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 STAT6P42226 847 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 ATN1P54259 1190 aaPredicted RBP20.48■□□□□ 0.87
TSSC4-210ENST00000496468 IGBP1P78318 339 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 MTERF2Q49AM1 385 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 SESTD1Q86VW0 696 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 KCTD17Q8N5Z5 321 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 PIGOQ8TEQ8 1089 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 LMBR1Q8WVP7 490 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 SEZ6LQ9BYH1 1024 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 ANKEF1Q9NU02 776 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 HDAC6Q9UBN7 1215 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 GTF2IRD1Q9UHL9 959 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 DNM3Q9UQ16 869 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 GRIN2DO15399 1336 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 NRCAMQ92823 1304 aa20.48■□□□□ 0.87
TSSC4-210ENST00000496468 A0A087X0B3 334 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 C17orf102A2RUQ5 167 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 ARVCFO00192 962 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 INSRRP14616 1297 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 PTPN11Q06124 597 aaPredicted RBP20.47■□□□□ 0.87
TSSC4-210ENST00000496468 ZNF484Q5JVG2 852 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 RRAGBQ5VZM2 374 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 UBE2Q1Q7Z7E8 422 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 PDILTQ8N807 584 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 SLC43A3Q8NBI5 491 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms