RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 FBXO47Q5MNV8 452 aa14.46□□□□□ -0.09
PTPRF-214ENST00000496043 ZNF746Q6NUN9 644 aaPredicted RBP14.46□□□□□ -0.09
PTPRF-214ENST00000496043 PDXDC2PQ6P474 469 aa14.46□□□□□ -0.09
PTPRF-214ENST00000496043 MTHFD1LQ6UB35 978 aa14.46□□□□□ -0.09
PTPRF-214ENST00000496043 SPRED2Q7Z698 418 aa14.46□□□□□ -0.09
PTPRF-214ENST00000496043 RASGRP4Q8TDF6 673 aa14.46□□□□□ -0.09
PTPRF-214ENST00000496043 SAMD11Q96NU1 681 aa14.46□□□□□ -0.09
PTPRF-214ENST00000496043 UIMC1Q96RL1 719 aa14.46□□□□□ -0.09
PTPRF-214ENST00000496043 C22orf23Q9BZE7 217 aa14.46□□□□□ -0.09
PTPRF-214ENST00000496043 UPF3BQ9BZI7 483 aaKnown RBP14.46□□□□□ -0.09
PTPRF-214ENST00000496043 SUGCTQ9HAC7 445 aa14.46□□□□□ -0.09
PTPRF-214ENST00000496043 MTUS1Q9ULD2 1270 aa14.46□□□□□ -0.09
PTPRF-214ENST00000496043 A0A0C4DFX4 3053 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 LPXNO60711 386 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 DEXIO95424 95 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 PSAPP07602 524 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 KRT76Q01546 638 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 STK3Q13188 491 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 AAK1Q2M2I8 961 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 KRT40Q6A162 431 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 TSHZ1Q6ZSZ6 1077 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 CKAP2LQ8IYA6 745 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 SMAP1Q8IYB5 467 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-214ENST00000496043 IL27Q8NEV9 243 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 SP7Q8TDD2 431 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-214ENST00000496043 ATP8B4Q8TF62 1192 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 TRAPPC12Q8WVT3 735 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 ZBTB10Q96DT7 871 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 IL17RAQ96F46 866 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 CELF4Q9BZC1 486 aaKnown RBP14.45□□□□□ -0.1
PTPRF-214ENST00000496043 COG5Q9UP83 839 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 PCDHA10Q9Y5I2 948 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 TRPV2Q9Y5S1 764 aa14.45□□□□□ -0.1
PTPRF-214ENST00000496043 CDH23Q9H251 3354 aa14.44□□□□□ -0.1
PTPRF-214ENST00000496043 GALNT17Q6IS24 598 aa14.44□□□□□ -0.1
PTPRF-214ENST00000496043 CCDC60Q8IWA6 550 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-214ENST00000496043 FAM177A1Q8N128 213 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-214ENST00000496043 FBXO22Q8NEZ5 403 aa14.44□□□□□ -0.1
PTPRF-214ENST00000496043 GDPD5Q8WTR4 605 aa14.44□□□□□ -0.1
PTPRF-214ENST00000496043 C17orf80Q9BSJ5 609 aa14.44□□□□□ -0.1
PTPRF-214ENST00000496043 PCDHA4Q9UN74 947 aa14.44□□□□□ -0.1
PTPRF-214ENST00000496043 MAFBQ9Y5Q3 323 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-214ENST00000496043 EIF5BO60841 1220 aaKnown RBP14.43□□□□□ -0.1
PTPRF-214ENST00000496043 ATP4AP20648 1035 aa14.43□□□□□ -0.1
PTPRF-214ENST00000496043 CD52P31358 61 aa14.43□□□□□ -0.1
PTPRF-214ENST00000496043 TMEM62Q0P6H9 643 aa14.43□□□□□ -0.1
PTPRF-214ENST00000496043 FAM43BQ6ZT52 329 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-214ENST00000496043 BLIDQ8IZY5 108 aa14.43□□□□□ -0.1
PTPRF-214ENST00000496043 TBCKQ8TEA7 893 aa14.43□□□□□ -0.1
PTPRF-214ENST00000496043 BBXQ8WY36 941 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-214ENST00000496043 FTHL17Q9BXU8 183 aa14.43□□□□□ -0.1
PTPRF-214ENST00000496043 SLKQ9H2G2 1235 aaPredicted RBP14.43□□□□□ -0.1
PTPRF-214ENST00000496043 AGO3Q9H9G7 860 aaKnown RBP14.43□□□□□ -0.1
PTPRF-214ENST00000496043 NRBP2Q9NSY0 501 aa14.43□□□□□ -0.1
PTPRF-214ENST00000496043 SAMM50Q9Y512 469 aa14.43□□□□□ -0.1
PTPRF-214ENST00000496043 COL1A2P08123 1366 aa14.43□□□□□ -0.1
PTPRF-214ENST00000496043 CHD9Q3L8U1 2897 aa14.43□□□□□ -0.1
PTPRF-214ENST00000496043 MSH4O15457 936 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 EDIL3O43854 480 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 CDKL5O76039 1030 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 ANAPC15P60006 121 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 EPC2Q52LR7 807 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 ODR4Q5SWX8 454 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 RTN4RL1Q86UN2 441 aaPredicted RBP14.42□□□□□ -0.1
PTPRF-214ENST00000496043 TMEM192Q8IY95 271 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 KIAA0319LQ8IZA0 1049 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 FIBCD1Q8N539 461 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 HLA-CQ95604 372 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 LENG9Q96B70 501 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 RIT2Q99578 217 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 GABBR1Q9UBS5 961 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 PADI3Q9ULW8 664 aa14.42□□□□□ -0.1
PTPRF-214ENST00000496043 KDM3AQ9Y4C1 1321 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 PRRC2BQ5JSZ5 2229 aaKnown RBP14.41□□□□□ -0.1
PTPRF-214ENST00000496043 WDR64B1ANS9 1081 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 MAGEB2O15479 319 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 XBP1P17861 261 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 PAK2Q13177 524 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 GPM6BQ13491 265 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 ANKRD1Q15327 319 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 PTPROQ16827 1216 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 Q4G0T1 1027 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 TRMT1LQ7Z2T5 733 aaKnown RBP14.41□□□□□ -0.1
PTPRF-214ENST00000496043 DAGLBQ8NCG7 672 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 FAM167AQ96KS9 214 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 TEKT3Q9BXF9 490 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 DISC1Q9NRI5 854 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 CEP131Q9UPN4 1083 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 PTPRSQ13332 1948 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 IGSF9BQ9UPX0 1349 aa14.41□□□□□ -0.1
PTPRF-214ENST00000496043 CYP3A7-CYP3A51PA0A087WV96 503 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 ZBTB42B2RXF5 422 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 H3BNC9 293 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 TNFRSF10AO00220 468 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 PFKFB2O60825 505 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 GAS7O60861 476 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 RB1P06400 928 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 STAG3L1P0CL83 205 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 BMP1P13497 986 aa14.4□□□□□ -0.1
PTPRF-214ENST00000496043 CYP3A7P24462 503 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms