RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 DCAF4Q8WV16 495 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 CASP10Q92851 521 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 SPATA33Q96N06 139 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 AAASQ9NRG9 546 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 KIAA1468Q9P260 1216 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 EXOC6BQ9Y2D4 811 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 CHGBP05060 677 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 SLC3A2P08195 630 aaKnown RBP11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 IFIT2P09913 472 aaKnown RBP11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 SP9P0CG40 484 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 STAG3L1P0CL83 205 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 TRIM27P14373 513 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 HOXC8P31273 242 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 COL9A3Q14050 684 aaPredicted RBP11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 FAM26DQ5JW98 314 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 PLPP4Q5VZY2 271 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 NPAS4Q8IUM7 802 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 THNSL1Q8IYQ7 743 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 FAM177A1Q8N128 213 aaPredicted RBP11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 CLASRPQ8N2M8 674 aaKnown RBP11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 IWS1Q96ST2 819 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 ADAM7Q9H2U9 754 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 CDH22Q9UJ99 828 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 DBR1Q9UK59 544 aaKnown RBP11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 DUSP12Q9UNI6 340 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 CCDC171Q6TFL3 1326 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 KIAA1671Q9BY89 1806 aa11.25□□□□□ -0.61
SMARCAL1-213ENST00000496037 GSG1L2A8MUP6 293 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 H3BRB1 525 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 GPR37O15354 613 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 SORBS3O60504 671 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 ARP10275 920 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 TBC1D8BQ0IIM8 1120 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 TDGQ13569 410 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 KCNC3Q14003 757 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 PPM1JQ5JR12 505 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 TTBK2Q6IQ55 1244 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 RUFY4Q6ZNE9 571 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 KCTD12Q96CX2 325 aaKnown RBP11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 POM121Q96HA1 1249 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 STRBPQ96SI9 672 aaKnown RBP11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 BOLA2Q9H3K6 86 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 RNPEPQ9H4A4 650 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 TUT1Q9H6E5 874 aaKnown RBP11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 ENTPD7Q9NQZ7 604 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 USP18Q9UMW8 372 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 USTQ9Y2C2 406 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 WDR19Q8NEZ3 1342 aa11.24□□□□□ -0.61
SMARCAL1-213ENST00000496037 TSPY2A6NKD2 308 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 FSCN2O14926 492 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 EIF3JO75822 258 aaKnown RBP11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 FGF18O76093 207 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 APPP05067 770 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 PRSS12P56730 875 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 ERVFC1P60507 584 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 HSDL1Q3SXM5 330 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 USH1GQ495M9 461 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 HSP90AB4PQ58FF6 505 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 SPECC1Q5M775 1068 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 BTNL9Q6UXG8 535 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 PACS2Q86VP3 889 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 SUMF1Q8NBK3 374 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 ACSF2Q96CM8 615 aaPredicted RBP11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 RMDN3Q96TC7 470 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 TCF25Q9BQ70 676 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 C16orf70Q9BSU1 422 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 EHMT1Q9H9B1 1298 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 CDHR5Q9HBB8 845 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 CYP26B1Q9NR63 512 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 TMEM260Q9NX78 707 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 PLXNA4Q9HCM2 1894 aa11.23□□□□□ -0.61
SMARCAL1-213ENST00000496037 SPEGQ15772 3267 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 SPTLC1O15269 473 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 GGPS1O95749 300 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 CHRNA1P02708 482 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 ARHGAP4P98171 946 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 LPIN1Q14693 890 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 CELF3Q5SZQ8 465 aaKnown RBP11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 ARHGEF16Q5VV41 709 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 MYSM1Q5VVJ2 828 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 FRMPD2Q68DX3 1309 aaPredicted RBP11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 XRRA1Q6P2D8 792 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 KCNV1Q6PIU1 500 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 TSHZ1Q6ZSZ6 1077 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 RSPH3Q86UC2 560 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 LAPTM4BQ86VI4 370 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 C1orf210Q8IVY1 113 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 FRAT1Q92837 279 aaPredicted RBP11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 TAAR1Q96RJ0 339 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 FTHL17Q9BXU8 183 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 SETD4Q9NVD3 440 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 PUF60Q9UHX1 559 aaKnown RBP11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 ANGPTL2Q9UKU9 493 aa11.22□□□□□ -0.61
SMARCAL1-213ENST00000496037 NOP56O00567 594 aaKnown RBP11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 EOMESO95936 686 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 LGALS2P05162 132 aa11.21□□□□□ -0.61
SMARCAL1-213ENST00000496037 WEE2P0C1S8 567 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms