RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ELMO3Q96BJ8 720 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 KLHDC7BQ96G42 594 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 ASB2Q96Q27 587 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 WDR18Q9BV38 432 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 WNT10AQ9GZT5 417 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 CD209Q9NNX6 404 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 OSGEPQ9NPF4 335 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 APEX2Q9UBZ4 518 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 TJP2Q9UDY2 1190 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 HIF3AQ9Y2N7 669 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 PPP2R3BQ9Y5P8 575 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 C5orf42Q9H799 3197 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 SIPA1L1O43166 1804 aa5.29□□□□□ -1.56
VPS52-222ENST00000495981 MGAMO43451 1857 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 FAM205AQ6ZU69 1335 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 LOC100289279A0A1B0GTE1 492 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 CDC14CA4D256 554 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 EIF5BO60841 1220 aaKnown RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 ADAM11O75078 769 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 RGS9O75916 674 aaPredicted RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 DNAJC8O75937 253 aaPredicted RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 ALBP02768 609 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 EPHX1P07099 455 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 COL6A1P12109 1028 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 PMLP29590 882 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 IGHMBP2P38935 993 aaKnown RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 IREB2P48200 963 aaKnown RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 MMP14P50281 582 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 AFF1P51825 1210 aaKnown RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 ZNF143P52747 638 aaPredicted RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 FKBP1AP62942 108 aaKnown RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 PPP2R2AP63151 447 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 PDE4BQ07343 736 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 NEXNQ0ZGT2 675 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 NFE2Q16621 373 aaPredicted RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 BEND3Q5T5X7 828 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 ZBTB37Q5TC79 503 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 TDRD10Q5VZ19 366 aaKnown RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 MCATQ8IVS2 390 aaKnown RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 SLFN12Q8IYM2 578 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 GALNT11Q8NCW6 608 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.28□□□□□ -1.56
VPS52-222ENST00000495981 PPM1EQ8WY54 764 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 ZKSCAN4Q969J2 545 aaPredicted RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 OSBP2Q969R2 916 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 ZNF775Q96BV0 537 aaPredicted RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 KAZALD1Q96I82 304 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 C8orf48Q96LL4 319 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 SLC6A18Q96N87 628 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 RUSC1Q9BVN2 902 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 STK31Q9BXU1 1019 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 ANKRD2Q9GZV1 360 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.28□□□□□ -1.56
VPS52-222ENST00000495981 KLHL25Q9H0H3 589 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 C11orf49Q9H6J7 331 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 MYH16Q9H6N6 1097 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 FBRSQ9HAH7 460 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 VEZTQ9HBM0 779 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 FAM86C1Q9NVL1 165 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 SUCOQ9UBS9 1254 aaKnown RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 MAPRE3Q9UPY8 281 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 DDX60LQ5H9U9 1706 aaKnown RBP5.28□□□□□ -1.56
VPS52-222ENST00000495981 ATRNL1Q5VV63 1379 aa5.28□□□□□ -1.56
VPS52-222ENST00000495981 ATAD5Q96QE3 1844 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 EPG5Q9HCE0 2579 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 ZNF521Q96K83 1311 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 TRBV23-1A0A0A0MS06 115 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 F8W031 263 aaPredicted RBP5.27□□□□□ -1.57
VPS52-222ENST00000495981 PDHXO00330 501 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 RGS13O14921 159 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 TBX1O43435 398 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 PEX14O75381 377 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 TAF5LO75529 589 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 ALDH1L1O75891 902 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 ITGAVP06756 1048 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 C6orf222P0C671 652 aaPredicted RBP5.27□□□□□ -1.57
VPS52-222ENST00000495981 DMDP11532 3685 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 RAG1P15918 1043 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 MX2P20592 715 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 HOXD10P28358 340 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 SOX5P35711 763 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 ADGRE1Q14246 886 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 PDE3AQ14432 1141 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 TTF1Q15361 905 aaPredicted RBP5.27□□□□□ -1.57
VPS52-222ENST00000495981 DLGAP5Q15398 846 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 SUPT20HL1Q3ZLR7 823 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 CFAP100Q494V2 611 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 SV2CQ496J9 727 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 PPM1JQ5JR12 505 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 AXDND1Q5T1B0 1012 aaPredicted RBP5.27□□□□□ -1.57
VPS52-222ENST00000495981 TTLL5Q6EMB2 1281 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 GPAT2Q6NUI2 795 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 FOXR1Q6PIV2 292 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 LHFPL2Q6ZUX7 228 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 SV2AQ7L0J3 742 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 UBE3DQ7Z6J8 389 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 LRRTM3Q86VH5 581 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 ZNF227Q86WZ6 799 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 VGLL2Q8N8G2 317 aa5.27□□□□□ -1.57
VPS52-222ENST00000495981 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms