RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 RPUSD2Q8IZ73 545 aaKnown RBP22.57■■□□□ 1.2
COL9A2-210ENST00000495948 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.57■■□□□ 1.2
COL9A2-210ENST00000495948 LAMA3Q16787 3333 aa22.57■■□□□ 1.2
COL9A2-210ENST00000495948 MARCH6O60337 910 aa22.56■■□□□ 1.2
COL9A2-210ENST00000495948 PRKCEQ02156 737 aa22.56■■□□□ 1.2
COL9A2-210ENST00000495948 SPIRE1Q08AE8 756 aa22.56■■□□□ 1.2
COL9A2-210ENST00000495948 UGCGQ16739 394 aa22.56■■□□□ 1.2
COL9A2-210ENST00000495948 TTC38Q5R3I4 469 aa22.56■■□□□ 1.2
COL9A2-210ENST00000495948 C16orf59Q7L2K0 433 aa22.56■■□□□ 1.2
COL9A2-210ENST00000495948 CKAP2LQ8IYA6 745 aa22.56■■□□□ 1.2
COL9A2-210ENST00000495948 VWCEQ96DN2 955 aa22.56■■□□□ 1.2
COL9A2-210ENST00000495948 RNPC3Q96LT9 517 aaKnown RBP22.56■■□□□ 1.2
COL9A2-210ENST00000495948 ZNF862O60290 1169 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 OATP04181 439 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 ACRP10323 421 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 MCM7P33993 719 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 THPOP40225 353 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 IGBP1P78318 339 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 ZNF484Q5JVG2 852 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 ZNF618Q5T7W0 954 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 RUFY4Q6ZNE9 571 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 HSCBQ8IWL3 235 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 MTMR9Q96QG7 549 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 CEP131Q9UPN4 1083 aa22.55■■□□□ 1.2
COL9A2-210ENST00000495948 ZBTB42B2RXF5 422 aa22.54■■□□□ 1.2
COL9A2-210ENST00000495948 EML1O00423 815 aa22.54■■□□□ 1.2
COL9A2-210ENST00000495948 CXCL10P02778 98 aa22.54■■□□□ 1.2
COL9A2-210ENST00000495948 PDCP20941 246 aa22.54■■□□□ 1.2
COL9A2-210ENST00000495948 RASIP1Q5U651 963 aa22.54■■□□□ 1.2
COL9A2-210ENST00000495948 LARP1BQ659C4 914 aaKnown RBP22.54■■□□□ 1.2
COL9A2-210ENST00000495948 ZNF365Q70YC5 407 aa22.54■■□□□ 1.2
COL9A2-210ENST00000495948 TRAPPC12Q8WVT3 735 aa22.54■■□□□ 1.2
COL9A2-210ENST00000495948 MTIF3Q9H2K0 278 aaKnown RBP22.54■■□□□ 1.2
COL9A2-210ENST00000495948 SIP14410 1827 aa22.54■■□□□ 1.2
COL9A2-210ENST00000495948 ATP2B1P20020 1258 aa22.53■■□□□ 1.2
COL9A2-210ENST00000495948 FXR1P51114 621 aaKnown RBP eCLIP22.53■■□□□ 1.2
COL9A2-210ENST00000495948 MCTP1Q6DN14 999 aa22.53■■□□□ 1.2
COL9A2-210ENST00000495948 DEFB128Q7Z7B8 93 aa22.53■■□□□ 1.2
COL9A2-210ENST00000495948 RSPH3Q86UC2 560 aa22.53■■□□□ 1.2
COL9A2-210ENST00000495948 HERVK_113Q902F9 699 aa22.53■■□□□ 1.2
COL9A2-210ENST00000495948 TMEM60Q9H2L4 133 aa22.53■■□□□ 1.2
COL9A2-210ENST00000495948 PCDHA2Q9Y5H9 948 aa22.53■■□□□ 1.2
COL9A2-210ENST00000495948 SMIM35A0A1B0GVV1 85 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 RSPH10B2B2RC85 870 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 DKC1O60832 514 aaKnown RBP eCLIP22.52■■□□□ 1.2
COL9A2-210ENST00000495948 CTSHP09668 335 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 OR52Z1P0C646 297 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 RSPH10BP0C881 870 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 PSMC5P62195 406 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 MBTPS1Q14703 1052 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 GPNMBQ14956 572 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 EPHA7Q15375 998 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 RILPL1Q5EBL4 403 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 FAM26DQ5JW98 314 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 NCAPH2Q6IBW4 605 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 MTHFD1LQ6UB35 978 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 TTC12Q9H892 705 aaPredicted RBP22.52■■□□□ 1.2
COL9A2-210ENST00000495948 PCDHA12Q9UN75 941 aa22.52■■□□□ 1.2
COL9A2-210ENST00000495948 NBNO60934 754 aa22.51■■□□□ 1.19
COL9A2-210ENST00000495948 C22orf31O95567 290 aa22.51■■□□□ 1.19
COL9A2-210ENST00000495948 FGBP02675 491 aa22.51■■□□□ 1.19
COL9A2-210ENST00000495948 ACTN1P12814 892 aa22.51■■□□□ 1.19
COL9A2-210ENST00000495948 XKR3Q5GH77 459 aa22.51■■□□□ 1.19
COL9A2-210ENST00000495948 BANK1Q8NDB2 785 aa22.51■■□□□ 1.19
COL9A2-210ENST00000495948 NEK9Q8TD19 979 aa22.51■■□□□ 1.19
COL9A2-210ENST00000495948 BAIAP3O94812 1187 aa22.5■■□□□ 1.19
COL9A2-210ENST00000495948 P4HBP07237 508 aaKnown RBP22.5■■□□□ 1.19
COL9A2-210ENST00000495948 QARSP47897 775 aaKnown RBP22.5■■□□□ 1.19
COL9A2-210ENST00000495948 TOB1P50616 345 aaPredicted RBP22.5■■□□□ 1.19
COL9A2-210ENST00000495948 MGAT3Q09327 533 aa22.5■■□□□ 1.19
COL9A2-210ENST00000495948 NBR1Q14596 966 aa22.5■■□□□ 1.19
COL9A2-210ENST00000495948 ZNF174Q15697 407 aa22.5■■□□□ 1.19
COL9A2-210ENST00000495948 DNAJB3Q8WWF6 145 aa22.5■■□□□ 1.19
COL9A2-210ENST00000495948 ZBTB10Q96DT7 871 aa22.5■■□□□ 1.19
COL9A2-210ENST00000495948 LXNQ9BS40 222 aa22.5■■□□□ 1.19
COL9A2-210ENST00000495948 NRBP2Q9NSY0 501 aa22.5■■□□□ 1.19
COL9A2-210ENST00000495948 SOX1O00570 391 aaPredicted RBP22.49■■□□□ 1.19
COL9A2-210ENST00000495948 KLRC1P26715 233 aa22.49■■□□□ 1.19
COL9A2-210ENST00000495948 TXKP42681 527 aa22.49■■□□□ 1.19
COL9A2-210ENST00000495948 CNKSR3Q6P9H4 555 aa22.49■■□□□ 1.19
COL9A2-210ENST00000495948 OTOP2Q7RTS6 562 aa22.49■■□□□ 1.19
COL9A2-210ENST00000495948 BRAPQ7Z569 592 aa22.49■■□□□ 1.19
COL9A2-210ENST00000495948 FTOQ9C0B1 505 aaKnown RBP eCLIP22.49■■□□□ 1.19
COL9A2-210ENST00000495948 FAM49AQ9H0Q0 323 aaPredicted RBP22.49■■□□□ 1.19
COL9A2-210ENST00000495948 SEPT9Q9UHD8 586 aaPredicted RBP22.49■■□□□ 1.19
COL9A2-210ENST00000495948 PCDHB6Q9Y5E3 794 aa22.49■■□□□ 1.19
COL9A2-210ENST00000495948 TET1Q8NFU7 2136 aa22.48■■□□□ 1.19
COL9A2-210ENST00000495948 POTEMA6NI47 508 aa22.48■■□□□ 1.19
COL9A2-210ENST00000495948 LAD1O00515 517 aa22.48■■□□□ 1.19
COL9A2-210ENST00000495948 MAGEB2O15479 319 aa22.48■■□□□ 1.19
COL9A2-210ENST00000495948 STBD1O95210 358 aa22.48■■□□□ 1.19
COL9A2-210ENST00000495948 MRPS6P82932 125 aaKnown RBP22.48■■□□□ 1.19
COL9A2-210ENST00000495948 TARBP2Q15633 366 aaKnown RBP22.48■■□□□ 1.19
COL9A2-210ENST00000495948 C4orf19Q8IY42 314 aa22.48■■□□□ 1.19
COL9A2-210ENST00000495948 NIFKQ9BYG3 293 aaKnown RBP22.48■■□□□ 1.19
COL9A2-210ENST00000495948 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.48■■□□□ 1.19
COL9A2-210ENST00000495948 VPS37CA5D8V6 355 aaPredicted RBP22.47■■□□□ 1.19
COL9A2-210ENST00000495948 SMAD3P84022 425 aaKnown RBP22.47■■□□□ 1.19
COL9A2-210ENST00000495948 TMEM266Q2M3C6 531 aa22.47■■□□□ 1.19
COL9A2-210ENST00000495948 TRMT1LQ7Z2T5 733 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms