RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TRPV2Q9Y5S1 764 aa15.48■□□□□ 0.07
COL1A1-209ENST00000495677 DCHS1Q96JQ0 3298 aa15.47■□□□□ 0.07
COL1A1-209ENST00000495677 FSCN2O14926 492 aa15.47■□□□□ 0.07
COL1A1-209ENST00000495677 GALR2O43603 387 aaPredicted RBP15.47■□□□□ 0.07
COL1A1-209ENST00000495677 CSPG5O95196 566 aa15.47■□□□□ 0.07
COL1A1-209ENST00000495677 SMARCA1P28370 1054 aa15.47■□□□□ 0.07
COL1A1-209ENST00000495677 NBL1P41271 181 aa15.47■□□□□ 0.07
COL1A1-209ENST00000495677 SARSP49591 514 aaKnown RBP15.47■□□□□ 0.07
COL1A1-209ENST00000495677 CYB5R4Q7L1T6 521 aa15.47■□□□□ 0.07
COL1A1-209ENST00000495677 VN1R2Q8NFZ6 395 aa15.47■□□□□ 0.07
COL1A1-209ENST00000495677 MICAL1Q8TDZ2 1067 aa15.47■□□□□ 0.07
COL1A1-209ENST00000495677 LZTS1Q9Y250 596 aa15.47■□□□□ 0.07
COL1A1-209ENST00000495677 H0Y858 1186 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 M0QZ92 97 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 PER2O15055 1255 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 INSRRP14616 1297 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 HOXB8P17481 243 aaPredicted RBP15.46■□□□□ 0.07
COL1A1-209ENST00000495677 SP4Q02446 784 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 PAN2Q504Q3 1202 aaKnown RBP15.46■□□□□ 0.07
COL1A1-209ENST00000495677 ERMP1Q7Z2K6 904 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 UBALD2Q8IYN6 164 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 GLG1Q92896 1179 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 CUL5Q93034 780 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 MAP3K14Q99558 947 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 CELF4Q9BZC1 486 aaKnown RBP15.46■□□□□ 0.07
COL1A1-209ENST00000495677 DIAPH3Q9NSV4 1193 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 LRFN2Q9ULH4 789 aa15.46■□□□□ 0.07
COL1A1-209ENST00000495677 SMIM35A0A1B0GVV1 85 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 FGF18O76093 207 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 SRGAP2BP0DMP2 458 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 ERVFC1P60507 584 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 PLCB3Q01970 1234 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 PAK2Q13177 524 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 ANKRD54Q6NXT1 300 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 USP17L6PQ6QN14 398 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 TMX1Q9H3N1 280 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 PCDHB7Q9Y5E2 793 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 PCDHGC5Q9Y5F6 944 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 UBIAD1Q9Y5Z9 338 aa15.45■□□□□ 0.06
COL1A1-209ENST00000495677 DMDP11532 3685 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 VPS13AQ96RL7 3174 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 PPFIA3O75145 1194 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 ITGB5P18084 799 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 MARK3P27448 753 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 TRDNQ13061 729 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 ODR4Q5SWX8 454 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 SYCE2Q6PIF2 218 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 ASCL5Q7RTU5 278 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 PLPPR4Q7Z2D5 763 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 PLEKHM2Q8IWE5 1019 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 PCYT2Q99447 389 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 SPZ1Q9BXG8 430 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 LNPKQ9C0E8 428 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 RGS18Q9NS28 235 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 C1orf112Q9NSG2 853 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 NR2E1Q9Y466 385 aa15.44■□□□□ 0.06
COL1A1-209ENST00000495677 ERICH2A1L162 156 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 PRR23AA6NEV1 266 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 GATMP50440 423 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 FAM189BP81408 668 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 RBM10P98175 930 aaKnown RBP15.43■□□□□ 0.06
COL1A1-209ENST00000495677 DIEXFQ68CQ4 756 aaKnown RBP15.43■□□□□ 0.06
COL1A1-209ENST00000495677 SLC24A5Q71RS6 500 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 SMC5Q8IY18 1101 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 FAM49AQ9H0Q0 323 aaPredicted RBP15.43■□□□□ 0.06
COL1A1-209ENST00000495677 ERVK-5Q9HDB9 667 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 NGRNQ9NPE2 291 aaKnown RBP15.43■□□□□ 0.06
COL1A1-209ENST00000495677 JADE2Q9NQC1 790 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 TMEM260Q9NX78 707 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 SORCS3Q9UPU3 1222 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 TRPC6Q9Y210 931 aa15.43■□□□□ 0.06
COL1A1-209ENST00000495677 C9IYK1 514 aa15.42■□□□□ 0.06
COL1A1-209ENST00000495677 IFIT3O14879 490 aaKnown RBP15.42■□□□□ 0.06
COL1A1-209ENST00000495677 PDGFBP01127 241 aaPredicted RBP15.42■□□□□ 0.06
COL1A1-209ENST00000495677 TECP42680 631 aa15.42■□□□□ 0.06
COL1A1-209ENST00000495677 IGBP1P78318 339 aa15.42■□□□□ 0.06
COL1A1-209ENST00000495677 KRT76Q01546 638 aa15.42■□□□□ 0.06
COL1A1-209ENST00000495677 MTMR1Q13613 665 aa15.42■□□□□ 0.06
COL1A1-209ENST00000495677 WTAPQ15007 396 aa15.42■□□□□ 0.06
COL1A1-209ENST00000495677 SPOUT1Q5T280 376 aaKnown RBP15.42■□□□□ 0.06
COL1A1-209ENST00000495677 COLGALT1Q8NBJ5 622 aa15.42■□□□□ 0.06
COL1A1-209ENST00000495677 MRPS27Q92552 414 aaKnown RBP15.42■□□□□ 0.06
COL1A1-209ENST00000495677 CWH43Q9H720 699 aa15.42■□□□□ 0.06
COL1A1-209ENST00000495677 ELAC1Q9H777 363 aaKnown RBP15.42■□□□□ 0.06
COL1A1-209ENST00000495677 TYW1Q9NV66 732 aaKnown RBP15.42■□□□□ 0.06
COL1A1-209ENST00000495677 PUF60Q9UHX1 559 aaKnown RBP15.42■□□□□ 0.06
COL1A1-209ENST00000495677 ATG7O95352 703 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 LAG3P18627 525 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 SLC26A2P50443 739 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 MTMR3Q13615 1198 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 PLCB4Q15147 1175 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 FAM102BQ5T8I3 360 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 THNSL1Q8IYQ7 743 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 KREMEN2Q8NCW0 462 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 ZBTB10Q96DT7 871 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 RRP36Q96EU6 259 aaKnown RBP15.41■□□□□ 0.06
COL1A1-209ENST00000495677 NECTIN4Q96NY8 510 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 AZI2Q9H6S1 392 aa15.41■□□□□ 0.06
COL1A1-209ENST00000495677 SENP2Q9HC62 589 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms