RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 THAP9Q9H5L6 903 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 ZSWIM4Q9H7M6 989 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 L2HGDHQ9H9P8 463 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 COL11A1P12107 1806 aaPredicted RBP16.4■□□□□ 0.22
CHPF2-204ENST00000495645 LGALS16A8MUM7 142 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 MFAP3LO75121 409 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 EYA4O95677 639 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 CYP2C8P10632 490 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 KRT9P35527 623 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 TMEM63BQ5T3F8 832 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 MCTP2Q6DN12 878 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 C1orf186Q6ZWK4 172 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 OPTNQ96CV9 577 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 TAF1DQ9H5J8 278 aaPredicted RBP16.4■□□□□ 0.22
CHPF2-204ENST00000495645 RLFQ13129 1914 aa16.4■□□□□ 0.22
CHPF2-204ENST00000495645 CASP4P49662 377 aa16.39■□□□□ 0.22
CHPF2-204ENST00000495645 ERVK-24P63145 666 aa16.39■□□□□ 0.22
CHPF2-204ENST00000495645 ZCWPW2Q504Y3 356 aa16.39■□□□□ 0.22
CHPF2-204ENST00000495645 ANKRD35Q8N283 1001 aa16.39■□□□□ 0.22
CHPF2-204ENST00000495645 KCTD10Q9H3F6 313 aa16.39■□□□□ 0.22
CHPF2-204ENST00000495645 NOL9Q5SY16 702 aaKnown RBP16.39■□□□□ 0.21
CHPF2-204ENST00000495645 VSIG10LQ86VR7 867 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 DAW1Q8N136 415 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 KRT222Q8N1A0 295 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 ACRBPQ8NEB7 543 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 EHMT1Q9H9B1 1298 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 PPP2R3BQ9Y5P8 575 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 BICDL2A1A5D9 508 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 GLTPD2A6NH11 291 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 USO1O60763 962 aaKnown RBP16.39■□□□□ 0.21
CHPF2-204ENST00000495645 TFRCP02786 760 aaKnown RBP16.39■□□□□ 0.21
CHPF2-204ENST00000495645 SEPT14Q6ZU15 432 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 KIFC3Q9BVG8 833 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 ASCC2Q9H1I8 757 aaPredicted RBP16.39■□□□□ 0.21
CHPF2-204ENST00000495645 USP20Q9Y2K6 914 aa16.39■□□□□ 0.21
CHPF2-204ENST00000495645 ANKRD20A12PQ8NF67 263 aa16.38■□□□□ 0.21
CHPF2-204ENST00000495645 HOXC10Q9NYD6 342 aa16.38■□□□□ 0.21
CHPF2-204ENST00000495645 PPP2R2CQ9Y2T4 447 aa16.38■□□□□ 0.21
CHPF2-204ENST00000495645 PITPNM2Q9BZ72 1349 aa16.38■□□□□ 0.21
CHPF2-204ENST00000495645 FRMD3A2A2Y4 597 aa16.38■□□□□ 0.21
CHPF2-204ENST00000495645 EEF1GP26641 437 aaKnown RBP16.38■□□□□ 0.21
CHPF2-204ENST00000495645 IREB2P48200 963 aaKnown RBP16.38■□□□□ 0.21
CHPF2-204ENST00000495645 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
CHPF2-204ENST00000495645 EPHA7Q15375 998 aa16.38■□□□□ 0.21
CHPF2-204ENST00000495645 ACAD9Q9H845 621 aa16.38■□□□□ 0.21
CHPF2-204ENST00000495645 LZTFL1Q9NQ48 299 aa16.38■□□□□ 0.21
CHPF2-204ENST00000495645 GINM1Q9NU53 330 aa16.38■□□□□ 0.21
CHPF2-204ENST00000495645 DICER1Q9UPY3 1922 aaKnown RBP16.37■□□□□ 0.21
CHPF2-204ENST00000495645 NRDCO43847 1150 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 TBCAO75347 108 aaKnown RBP16.37■□□□□ 0.21
CHPF2-204ENST00000495645 PLEKP08567 350 aaPredicted RBP16.37■□□□□ 0.21
CHPF2-204ENST00000495645 GNG11P61952 73 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 SPAG1Q07617 926 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 ADAM9Q13443 819 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 LBX2Q6XYB7 198 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 RDH13Q8NBN7 331 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 ZSWIM2Q8NEG5 633 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 ABHD10Q9NUJ1 306 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 PHIPQ8WWQ0 1821 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 BACH1O14867 736 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 TRIM21P19474 475 aaKnown RBP16.37■□□□□ 0.21
CHPF2-204ENST00000495645 NOC3LQ8WTT2 800 aaKnown RBP16.37■□□□□ 0.21
CHPF2-204ENST00000495645 FIZ1Q96SL8 496 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 RIT2Q99578 217 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 NDST4Q9H3R1 872 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 MMRN2Q9H8L6 949 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 KCND1Q9NSA2 647 aa16.37■□□□□ 0.21
CHPF2-204ENST00000495645 ZNF862O60290 1169 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 HIP1RO75146 1068 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 FAM13AO94988 1023 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 NR2F2P24468 414 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 IRX3P78415 501 aaPredicted RBP16.36■□□□□ 0.21
CHPF2-204ENST00000495645 CCDC40Q4G0X9 1142 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 ODR4Q5SWX8 454 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 PADI6Q6TGC4 694 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 ANKRD13AQ8IZ07 590 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 MNS1Q8NEH6 495 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 ARHGEF35A5YM69 484 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 H2AFXP16104 143 aaPredicted RBP16.36■□□□□ 0.21
CHPF2-204ENST00000495645 MAPK7Q13164 816 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 SH3D19Q5HYK7 790 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 NSUN6Q8TEA1 469 aaKnown RBP16.36■□□□□ 0.21
CHPF2-204ENST00000495645 TUFT1Q9NNX1 390 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 TRIM10Q9UDY6 481 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 PCDHB13Q9Y5F0 798 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 FHOD1Q9Y613 1164 aa16.36■□□□□ 0.21
CHPF2-204ENST00000495645 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
CHPF2-204ENST00000495645 HERVK_113P62684 666 aa16.35■□□□□ 0.21
CHPF2-204ENST00000495645 MOGSQ13724 837 aa16.35■□□□□ 0.21
CHPF2-204ENST00000495645 TERF2Q15554 542 aa16.35■□□□□ 0.21
CHPF2-204ENST00000495645 SWSAP1Q6NVH7 229 aa16.35■□□□□ 0.21
CHPF2-204ENST00000495645 WDR59Q6PJI9 974 aa16.35■□□□□ 0.21
CHPF2-204ENST00000495645 CYFIP1Q7L576 1253 aa16.35■□□□□ 0.21
CHPF2-204ENST00000495645 UBXN4Q92575 508 aa16.35■□□□□ 0.21
CHPF2-204ENST00000495645 NACC1Q96RE7 527 aa16.35■□□□□ 0.21
CHPF2-204ENST00000495645 MOV10L1Q9BXT6 1211 aaKnown RBP16.35■□□□□ 0.21
CHPF2-204ENST00000495645 LRRC27Q9C0I9 530 aa16.35■□□□□ 0.21
CHPF2-204ENST00000495645 POLR3GO15318 223 aaPredicted RBP16.35■□□□□ 0.21
CHPF2-204ENST00000495645 TGFB1I1O43294 461 aa16.35■□□□□ 0.21
CHPF2-204ENST00000495645 AKAP3O75969 853 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms