RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	RAD9A	Q99638	391 aa		11.65	□□□□□ -0.54
NEPRO-222	ENST00000494891	LARP6	Q9BRS8	491 aa	Known RBP	11.65	□□□□□ -0.54
NEPRO-222	ENST00000494891	PCDHA10	Q9Y5I2	948 aa		11.65	□□□□□ -0.54
NEPRO-222	ENST00000494891	IGSF9B	Q9UPX0	1349 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	WDR64	B1ANS9	1081 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	ZBTB42	B2RXF5	422 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	PSMD10	O75832	226 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	CA3	P07451	260 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	PSAP	P07602	524 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	FDPS	P14324	419 aa	Known RBP	11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	ATP4A	P20648	1035 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	SFN	P31947	248 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	NEK4	P51957	841 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	DEFB103A	P81534	67 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	TAP1	Q03518	808 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	NONO	Q15233	471 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	ME3	Q16798	604 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	C8orf34	Q49A92	452 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	ZNF484	Q5JVG2	852 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	IER5	Q5VY09	327 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	PPP4R3A	Q6IN85	833 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	ZNF710	Q8N1W2	664 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	SLC17A8	Q8NDX2	589 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	MAFA	Q8NHW3	353 aa	Predicted RBP	11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	SP7	Q8TDD2	431 aa	Predicted RBP	11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	TOP1MT	Q969P6	601 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	AIFM3	Q96NN9	605 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	GAS2L1	Q99501	681 aa	Predicted RBP	11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	NAP1L4	Q99733	375 aa	Known RBP	11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	IFIH1	Q9BYX4	1025 aa	Known RBP	11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	ZNF302	Q9NR11	478 aa		11.64	□□□□□ -0.55
NEPRO-222	ENST00000494891	TBX3	O15119	743 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	TLL1	O43897	1013 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	AMH	P03971	560 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	MYOG	P15173	224 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	GCFC2	P16383	781 aa	Known RBP	11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	JAK3	P52333	1124 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	MRPS6	P82932	125 aa	Known RBP	11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	FBXO47	Q5MNV8	452 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	SWSAP1	Q6NVH7	229 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	PDXDC2P	Q6P474	469 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	MTHFD1L	Q6UB35	978 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	TSHZ1	Q6ZSZ6	1077 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	NSUN7	Q8NE18	718 aa	Known RBP	11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	ETNPPL	Q8TBG4	499 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	DNAJB3	Q8WWF6	145 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	FAM167A	Q96KS9	214 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	PRDM12	Q9H4Q4	367 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	DISC1	Q9NRI5	854 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	ORC3	Q9UBD5	711 aa	Predicted RBP	11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	TCEAL9	Q9UHQ7	104 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	CEP131	Q9UPN4	1083 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	TRPC6	Q9Y210	931 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	INSL6	Q9Y581	213 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	REV3L	O60673	3130 aa		11.63	□□□□□ -0.55
NEPRO-222	ENST00000494891	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	BACH1	O14867	736 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	CTSH	P09668	335 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	KLRC1	P26715	233 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	RBM25	P49756	843 aa	Known RBP	11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	ADGRE1	Q14246	886 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	LPIN1	Q14693	890 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	TNFRSF25	Q93038	417 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	FAM20A	Q96MK3	541 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	KIF2C	Q99661	725 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	TEKT3	Q9BXF9	490 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	FTHL17	Q9BXU8	183 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	OSBPL7	Q9BZF2	842 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	KCNMB3	Q9NPA1	279 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	LMCD1	Q9NZU5	365 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	KCNJ14	Q9UNX9	436 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	CDY2A	Q9Y6F7	541 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	TTC3	P53804	2025 aa		11.62	□□□□□ -0.55
NEPRO-222	ENST00000494891	CCDC194	A0A1B0GVG4	234 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	DDX39A	O00148	427 aa	Known RBP	11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	MAGEB2	O15479	319 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	GAS7	O60861	476 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	LARGE1	O95461	756 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	TDP2	O95551	362 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	C22orf31	O95567	290 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	ERVK-21	P61565	698 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	IGBP1	P78318	339 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	LRCH2	Q5VUJ6	765 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	NEK8	Q86SG6	692 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	KIAA0319L	Q8IZA0	1049 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	CRIPAK	Q8N1N5	446 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	LINC01465	Q8N7H1	131 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	LLPH	Q9BRT6	129 aa	Known RBP	11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	ZBED2	Q9BTP6	218 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	CELF4	Q9BZC1	486 aa	Known RBP	11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	LIMCH1	Q9UPQ0	1083 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	TRPV2	Q9Y5S1	764 aa		11.61	□□□□□ -0.55
NEPRO-222	ENST00000494891	LINC01553	A4QN01	128 aa		11.6	□□□□□ -0.55
NEPRO-222	ENST00000494891		M0QZ92	97 aa		11.6	□□□□□ -0.55
NEPRO-222	ENST00000494891	ZNF862	O60290	1169 aa		11.6	□□□□□ -0.55
NEPRO-222	ENST00000494891	ARHGEF15	O94989	841 aa		11.6	□□□□□ -0.55
NEPRO-222	ENST00000494891	GHR	P10912	638 aa		11.6	□□□□□ -0.55
NEPRO-222	ENST00000494891	ST3GAL1	Q11201	340 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms