RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 PNMA1Q8ND90 353 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 STKLD1Q8NE28 680 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 ERMNQ8TAM6 284 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 SPATA20Q8TB22 786 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 RSPH1Q8WYR4 309 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 RAPGEF5Q92565 580 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 KCNN1Q92952 543 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 PPP2R3CQ969Q6 453 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 SLC35B4Q969S0 331 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 ZNF775Q96BV0 537 aaPredicted RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 LRRC45Q96CN5 670 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 TLCD1Q96CP7 247 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CHMP6Q96FZ7 201 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 MAML3Q96JK9 1138 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CAPZA3Q96KX2 299 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 FAM227BQ96M60 508 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 FGD4Q96M96 766 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 TCEANC2Q96MN5 208 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 OLFM3Q96PB7 478 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 RAB3IPQ96QF0 476 aaPredicted RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 HAPLN3Q96S86 360 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 NDNQ99608 321 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 DNAJC7Q99615 494 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 FSD1Q9BTV5 496 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 YIPF2Q9BWQ6 316 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CARD9Q9H257 536 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 UNC45AQ9H3U1 944 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 RNPEPL1Q9HAU8 725 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 LUC7LQ9NQ29 371 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 PCMTD2Q9NV79 361 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 TBCCD1Q9NVR7 557 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 BABAM1Q9NWV8 329 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 TUBA8Q9NY65 449 aaPredicted RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 IL1RAPL1Q9NZN1 696 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 PDP2Q9P2J9 529 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 RNF14Q9UBS8 474 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 LIMA1Q9UHB6 759 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 DMGDHQ9UI17 866 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 SCOCQ9UIL1 159 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 G3BP2Q9UN86 482 aaKnown RBP2.98□□□□□ -1.93
MDC1-208ENST00000494654 KIAA1024Q9UPX6 916 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 PLAAQ9Y263 795 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 LRCH1Q9Y2L9 728 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 DAAM1Q9Y4D1 1078 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CLIC4Q9Y696 253 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 USP3Q9Y6I4 520 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 COMMD3-BMI1R4GMX3 469 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CACNA1SQ13698 1873 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 PCM1Q15154 2024 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 METP08581 1390 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 FLT4P35916 1363 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 TMEM2Q9UHN6 1383 aa2.98□□□□□ -1.93
MDC1-208ENST00000494654 CROCCQ5TZA2 2017 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 ANKRD31Q8N7Z5 1873 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 A0A1B0GVG6 124 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 A0A1W2PRU2 124 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PALM3A6NDB9 673 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 USP17L5A8MUK1 530 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 KIF28PB7ZC32 967 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 F8W031 263 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 GCOM1H8Y6P7 765 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 CES2O00748 559 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 WDR46O15213 610 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 TPD52L2O43399 206 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 ATP9BO43861 1147 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 DTNBO60941 627 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PEX11AO75192 247 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 MBD4O95243 580 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 IL2RAP01589 272 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 LMNAP02545 664 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 ADH1AP07327 375 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CYP21A2P08686 494 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 VIL1P09327 827 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 CLTAP09496 248 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PARP1P09874 1014 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 MYZAPP0CAP1 466 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 MYBP10242 640 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 RARAP10276 462 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 HARSP12081 509 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 RHOQP17081 205 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CYP11B2P19099 503 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 VCAM1P19320 739 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 BMP6P22004 513 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 POLD1P28340 1107 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CDC25CP30307 473 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 PDE6BP35913 854 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 STAT6P42226 847 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 MSH2P43246 934 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 MAGEA10P43363 369 aaPredicted RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 ACADVLP49748 655 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 SERPINB8P50452 374 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 SCNN1BP51168 640 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 COPB1P53618 953 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 OXCT1P55809 520 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 EIF3BP55884 814 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 SESN3P58005 492 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 GPSM2P81274 684 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 MRPS25P82663 173 aaKnown RBP2.97□□□□□ -1.93
MDC1-208ENST00000494654 CDK17Q00537 523 aa2.97□□□□□ -1.93
MDC1-208ENST00000494654 CBX3Q13185 183 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms