RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CTSHP09668 335 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 ZSCAN22P10073 491 aaPredicted RBP12.5□□□□□ -0.41
APTX-230ENST00000494649 GRIN1Q05586 938 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
APTX-230ENST00000494649 PRPF38BQ5VTL8 546 aaKnown RBP12.5□□□□□ -0.41
APTX-230ENST00000494649 PLA2G4FQ68DD2 849 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 RUFY4Q6ZNE9 571 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 AFAP1L1Q8TED9 768 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 DHX38Q92620 1227 aaKnown RBP12.5□□□□□ -0.41
APTX-230ENST00000494649 PPP1R16BQ96T49 567 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 EIF2AK1Q9BQI3 630 aaKnown RBP12.5□□□□□ -0.41
APTX-230ENST00000494649 LXNQ9BS40 222 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 FAM49AQ9H0Q0 323 aaPredicted RBP12.5□□□□□ -0.41
APTX-230ENST00000494649 TBX21Q9UL17 535 aa12.5□□□□□ -0.41
APTX-230ENST00000494649 F13A1P00488 732 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 MARCKSP29966 332 aaPredicted RBP12.49□□□□□ -0.41
APTX-230ENST00000494649 ANP32AP39687 249 aaKnown RBP12.49□□□□□ -0.41
APTX-230ENST00000494649 TMEM62Q0P6H9 643 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 MARCH8Q5T0T0 291 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 ATP8B4Q8TF62 1192 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 USP28Q96RU2 1077 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 TUBE1Q9UJT0 475 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 DDX11L8A8MPP1 907 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 OATP04181 439 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 MAGEA10P43363 369 aaPredicted RBP12.49□□□□□ -0.41
APTX-230ENST00000494649 MTERF2Q49AM1 385 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 SPECC1Q5M775 1068 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 SESTD1Q86VW0 696 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 ZNF579Q8NAF0 562 aaKnown RBP12.49□□□□□ -0.41
APTX-230ENST00000494649 NOC4LQ9BVI4 516 aaKnown RBP12.49□□□□□ -0.41
APTX-230ENST00000494649 ZDHHC9Q9Y397 364 aa12.49□□□□□ -0.41
APTX-230ENST00000494649 NRCAMQ92823 1304 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 MED24O75448 989 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 SLITRK3O94933 977 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 CSF2RAP15509 400 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 THPOP40225 353 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 QARSP47897 775 aaKnown RBP12.48□□□□□ -0.41
APTX-230ENST00000494649 NPEPPSP55786 919 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 PSMC5P62195 406 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 ATP2C1P98194 919 aaPredicted RBP12.48□□□□□ -0.41
APTX-230ENST00000494649 EPHA7Q15375 998 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 TMEM266Q2M3C6 531 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 TPRNQ4KMQ1 711 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 DTHD1Q6ZMT9 781 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 PIGOQ8TEQ8 1089 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 ZNF668Q96K58 619 aaPredicted RBP12.48□□□□□ -0.41
APTX-230ENST00000494649 PLIN2Q99541 437 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 WNT8AQ9H1J5 351 aa12.48□□□□□ -0.41
APTX-230ENST00000494649 ZSCAN16Q9H4T2 348 aaPredicted RBP12.48□□□□□ -0.41
APTX-230ENST00000494649 MYH9P35579 1960 aaKnown RBP12.48□□□□□ -0.41
APTX-230ENST00000494649 ZBTB42B2RXF5 422 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 HBP1O60381 514 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 P4HBP07237 508 aaKnown RBP12.47□□□□□ -0.41
APTX-230ENST00000494649 ACRP10323 421 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 KLRC1P26715 233 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 PTPN11Q06124 597 aaPredicted RBP12.47□□□□□ -0.41
APTX-230ENST00000494649 POTEGQ6S5H5 508 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 ANO5Q75V66 913 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 DEFB128Q7Z7B8 93 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 LRRC71Q8N4P6 559 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 METTL13Q8N6R0 699 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 DNAJB3Q8WWF6 145 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 BBXQ8WY36 941 aaPredicted RBP12.47□□□□□ -0.41
APTX-230ENST00000494649 LBHD1Q9BQE6 289 aaPredicted RBP12.47□□□□□ -0.41
APTX-230ENST00000494649 LRWD1Q9UFC0 647 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 GINS2Q9Y248 185 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 KIAA0355O15063 1070 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 SLC34A2O95436 690 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 TIMP1P01033 207 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 SLC26A2P50443 739 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 ADAM17P78536 824 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 DNM1Q05193 864 aaKnown RBP12.47□□□□□ -0.41
APTX-230ENST00000494649 ORC2Q13416 577 aaPredicted RBP12.47□□□□□ -0.41
APTX-230ENST00000494649 ECM1Q16610 540 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 ZNF618Q5T7W0 954 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 SERINC5Q86VE9 423 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 CATSPER3Q86XQ3 398 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 RDM1Q8NG50 284 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 OSBPL7Q9BZF2 842 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 SUGCTQ9HAC7 445 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 TSHZ2Q9NRE2 1034 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 KAT6AQ92794 2004 aa12.47□□□□□ -0.41
APTX-230ENST00000494649 WDR81Q562E7 1941 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 STBD1O95210 358 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 SPATA31C1P0DKV0 1188 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 GNAT1P11488 350 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 CKBP12277 381 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 NCLP19338 710 aaKnown RBP12.46□□□□□ -0.41
APTX-230ENST00000494649 HOXC8P31273 242 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 YWHABP31946 246 aaKnown RBP12.46□□□□□ -0.41
APTX-230ENST00000494649 CLCN3P51790 818 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 EPHB4P54760 987 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 MTHFD1LQ6UB35 978 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 SNX29Q8TEQ0 813 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 CLIC6Q96NY7 704 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 HSD17B14Q9BPX1 270 aa12.46□□□□□ -0.41
APTX-230ENST00000494649 BRD1O95696 1058 aa12.46□□□□□ -0.42
APTX-230ENST00000494649 CCT6AP40227 531 aaKnown RBP12.46□□□□□ -0.42
APTX-230ENST00000494649 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms