RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 MAPRE3Q9UPY8 281 aa8.16□□□□□ -1.1
MSL3-217ENST00000494268 PRAMEF22A3QJZ6 481 aa8.15□□□□□ -1.1
MSL3-217ENST00000494268 GAS7O60861 476 aa8.15□□□□□ -1.1
MSL3-217ENST00000494268 MPIG6BO95866 241 aa8.15□□□□□ -1.1
MSL3-217ENST00000494268 COL6A1P12109 1028 aa8.15□□□□□ -1.1
MSL3-217ENST00000494268 PTGS1P23219 599 aa8.15□□□□□ -1.1
MSL3-217ENST00000494268 MCTP2Q6DN12 878 aa8.15□□□□□ -1.1
MSL3-217ENST00000494268 MARCH10Q8NA82 808 aaPredicted RBP8.15□□□□□ -1.1
MSL3-217ENST00000494268 ZCCHC14Q8WYQ9 949 aaKnown RBP8.15□□□□□ -1.1
MSL3-217ENST00000494268 ELF4Q99607 663 aaPredicted RBP8.15□□□□□ -1.1
MSL3-217ENST00000494268 AMNQ9BXJ7 453 aa8.15□□□□□ -1.1
MSL3-217ENST00000494268 INCENPQ9NQS7 918 aa8.15□□□□□ -1.1
MSL3-217ENST00000494268 GOLGA6L22H0YM25 854 aa8.14□□□□□ -1.11
MSL3-217ENST00000494268 ZNF28P17035 718 aa8.14□□□□□ -1.11
MSL3-217ENST00000494268 SCNN1BP51168 640 aa8.14□□□□□ -1.11
MSL3-217ENST00000494268 ZNF174Q15697 407 aa8.14□□□□□ -1.11
MSL3-217ENST00000494268 TRMT10BQ6PF06 316 aaKnown RBP8.14□□□□□ -1.11
MSL3-217ENST00000494268 LRSAM1Q6UWE0 723 aa8.14□□□□□ -1.11
MSL3-217ENST00000494268 STRA8Q7Z7C7 330 aa8.14□□□□□ -1.11
MSL3-217ENST00000494268 SMC1BQ8NDV3 1235 aa8.14□□□□□ -1.11
MSL3-217ENST00000494268 HIPK4Q8NE63 616 aa8.14□□□□□ -1.11
MSL3-217ENST00000494268 GPR101Q96P66 508 aaPredicted RBP8.14□□□□□ -1.11
MSL3-217ENST00000494268 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.14□□□□□ -1.11
MSL3-217ENST00000494268 KCND1Q9NSA2 647 aa8.14□□□□□ -1.11
MSL3-217ENST00000494268 GALNT8Q9NY28 637 aa8.14□□□□□ -1.11
MSL3-217ENST00000494268 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.14□□□□□ -1.11
MSL3-217ENST00000494268 LOC105371045A0A1W2PR82 267 aa8.13□□□□□ -1.11
MSL3-217ENST00000494268 FBXO21O94952 628 aa8.13□□□□□ -1.11
MSL3-217ENST00000494268 STAT3P40763 770 aa8.13□□□□□ -1.11
MSL3-217ENST00000494268 FZD5Q13467 585 aa8.13□□□□□ -1.11
MSL3-217ENST00000494268 ADAMTS17Q8TE56 1095 aa8.13□□□□□ -1.11
MSL3-217ENST00000494268 FOXRED1Q96CU9 486 aaPredicted RBP8.13□□□□□ -1.11
MSL3-217ENST00000494268 PCIF1Q9H4Z3 704 aa8.13□□□□□ -1.11
MSL3-217ENST00000494268 ACSS2Q9NR19 701 aa8.13□□□□□ -1.11
MSL3-217ENST00000494268 SPTLC3Q9NUV7 552 aa8.13□□□□□ -1.11
MSL3-217ENST00000494268 KNG1P01042 644 aa8.12□□□□□ -1.11
MSL3-217ENST00000494268 KCNC1P48547 511 aa8.12□□□□□ -1.11
MSL3-217ENST00000494268 SMAD2Q15796 467 aaKnown RBP8.12□□□□□ -1.11
MSL3-217ENST00000494268 KRTAP19-4Q3LI73 84 aa8.12□□□□□ -1.11
MSL3-217ENST00000494268 DDX46Q7L014 1031 aaKnown RBP8.12□□□□□ -1.11
MSL3-217ENST00000494268 ZNF761Q86XN6 746 aaPredicted RBP8.12□□□□□ -1.11
MSL3-217ENST00000494268 TXNDC5Q8NBS9 432 aaKnown RBP8.12□□□□□ -1.11
MSL3-217ENST00000494268 OR2W6PQ8NHA6 318 aa8.12□□□□□ -1.11
MSL3-217ENST00000494268 CAAP1Q9H8G2 361 aa8.12□□□□□ -1.11
MSL3-217ENST00000494268 L2HGDHQ9H9P8 463 aa8.12□□□□□ -1.11
MSL3-217ENST00000494268 SPO11Q9Y5K1 396 aa8.12□□□□□ -1.11
MSL3-217ENST00000494268 TGM5O43548 720 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 CYP7B1O75881 506 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 ADCYAP1R1P41586 468 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 ECE1P42892 770 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 SART3Q15020 963 aaKnown RBP8.11□□□□□ -1.11
MSL3-217ENST00000494268 SPOCD1Q6ZMY3 1216 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 RTN4RL1Q86UN2 441 aaPredicted RBP8.11□□□□□ -1.11
MSL3-217ENST00000494268 NUDT10Q8NFP7 164 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 FEZF2Q8TBJ5 459 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 NUDT11Q96G61 164 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 C16orf92Q96LL3 132 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 KCNC2Q96PR1 638 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 WRNIP1Q96S55 665 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 TOMM22Q9NS69 142 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 ASB1Q9Y576 335 aa8.11□□□□□ -1.11
MSL3-217ENST00000494268 KLHL18O94889 574 aa8.1□□□□□ -1.11
MSL3-217ENST00000494268 FKBP9O95302 570 aa8.1□□□□□ -1.11
MSL3-217ENST00000494268 CYP17A1P05093 508 aa8.1□□□□□ -1.11
MSL3-217ENST00000494268 KPNA1P52294 538 aaPredicted RBP8.1□□□□□ -1.11
MSL3-217ENST00000494268 IL2P60568 153 aa8.1□□□□□ -1.11
MSL3-217ENST00000494268 IL13RA1P78552 427 aa8.1□□□□□ -1.11
MSL3-217ENST00000494268 STRN3Q13033 797 aa8.1□□□□□ -1.11
MSL3-217ENST00000494268 RGL3Q3MIN7 710 aa8.1□□□□□ -1.11
MSL3-217ENST00000494268 ESRP1Q6NXG1 681 aaKnown RBP8.1□□□□□ -1.11
MSL3-217ENST00000494268 FKBP9P1Q75LS8 142 aa8.1□□□□□ -1.11
MSL3-217ENST00000494268 ZDHHC14Q8IZN3 488 aa8.1□□□□□ -1.11
MSL3-217ENST00000494268 CHAC2Q8WUX2 184 aa8.1□□□□□ -1.11
MSL3-217ENST00000494268 YTHDC1Q96MU7 727 aaKnown RBP8.1□□□□□ -1.11
MSL3-217ENST00000494268 LUC7LQ9NQ29 371 aaKnown RBP8.1□□□□□ -1.11
MSL3-217ENST00000494268 NOBOXO60393 691 aa8.09□□□□□ -1.11
MSL3-217ENST00000494268 VIL1P09327 827 aaKnown RBP8.09□□□□□ -1.11
MSL3-217ENST00000494268 ID4P47928 161 aa8.09□□□□□ -1.11
MSL3-217ENST00000494268 FNTBP49356 437 aa8.09□□□□□ -1.11
MSL3-217ENST00000494268 DHCR24Q15392 516 aa8.09□□□□□ -1.11
MSL3-217ENST00000494268 NT5DC1Q5TFE4 455 aa8.09□□□□□ -1.11
MSL3-217ENST00000494268 BTBD2Q9BX70 525 aa8.09□□□□□ -1.11
MSL3-217ENST00000494268 FAM126AQ9BYI3 521 aaPredicted RBP8.09□□□□□ -1.11
MSL3-217ENST00000494268 ZCCHC4Q9H5U6 513 aa8.09□□□□□ -1.11
MSL3-217ENST00000494268 NEMP1O14524 444 aa8.08□□□□□ -1.12
MSL3-217ENST00000494268 CYP1A1P04798 512 aaPredicted RBP8.08□□□□□ -1.12
MSL3-217ENST00000494268 SOX5P35711 763 aa8.08□□□□□ -1.12
MSL3-217ENST00000494268 SMAD3P84022 425 aaKnown RBP8.08□□□□□ -1.12
MSL3-217ENST00000494268 KRT26Q7Z3Y9 468 aa8.08□□□□□ -1.12
MSL3-217ENST00000494268 EFHBQ8N7U6 833 aa8.08□□□□□ -1.12
MSL3-217ENST00000494268 RTF1Q92541 710 aaKnown RBP8.08□□□□□ -1.12
MSL3-217ENST00000494268 TMEM168Q9H0V1 697 aa8.08□□□□□ -1.12
MSL3-217ENST00000494268 ZMAT4Q9H898 229 aa8.08□□□□□ -1.12
MSL3-217ENST00000494268 FTSJ1Q9UET6 329 aa8.08□□□□□ -1.12
MSL3-217ENST00000494268 PRKAB1Q9Y478 270 aa8.08□□□□□ -1.12
MSL3-217ENST00000494268 OTOL1A6NHN0 477 aaPredicted RBP8.07□□□□□ -1.12
MSL3-217ENST00000494268 H0Y858 1186 aa8.07□□□□□ -1.12
MSL3-217ENST00000494268 CHGBP05060 677 aa8.07□□□□□ -1.12
MSL3-217ENST00000494268 BPIP17213 487 aa8.07□□□□□ -1.12
MSL3-217ENST00000494268 LSSP48449 732 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms