RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 CHAMP1Q96JM3 812 aa3.43□□□□□ -1.86
PTPN12-212ENST00000494248 APBA2Q99767 749 aa3.43□□□□□ -1.86
PTPN12-212ENST00000494248 MLST8Q9BVC4 326 aa3.43□□□□□ -1.86
PTPN12-212ENST00000494248 PDGFDQ9GZP0 370 aaPredicted RBP3.43□□□□□ -1.86
PTPN12-212ENST00000494248 SLC6A20Q9NP91 592 aa3.43□□□□□ -1.86
PTPN12-212ENST00000494248 PPARGC1AQ9UBK2 798 aaKnown RBP3.43□□□□□ -1.86
PTPN12-212ENST00000494248 PACSIN3Q9UKS6 424 aa3.43□□□□□ -1.86
PTPN12-212ENST00000494248 GRID2IPA4D2P6 1211 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 ACOT7O00154 380 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 MEFVO15553 781 aaPredicted RBP3.42□□□□□ -1.86
PTPN12-212ENST00000494248 MAFKO60675 156 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 CTGFP29279 349 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 HOXC12P31275 282 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 ECI1P42126 302 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 ETV4P43268 484 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 PAK2Q13177 524 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 TOB2Q14106 344 aaPredicted RBP3.42□□□□□ -1.86
PTPN12-212ENST00000494248 NCAPHQ15003 741 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 RHOUQ7L0Q8 258 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 ADGRE4PQ86SQ3 457 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 ZDHHC5Q9C0B5 715 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 SLC39A2Q9NP94 309 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 PUF60Q9UHX1 559 aaKnown RBP3.42□□□□□ -1.86
PTPN12-212ENST00000494248 EFR3BQ9Y2G0 817 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 SH3BP1Q9Y3L3 701 aa3.42□□□□□ -1.86
PTPN12-212ENST00000494248 CUTAO60888 179 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 CPP00450 1065 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 LTBRP36941 435 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 HGFACQ04756 655 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 CRHR2Q13324 411 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 OLFML1Q6UWY5 402 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 TRIM48Q8IWZ4 208 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 ZNF654Q8IZM8 581 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 MICAL1Q8TDZ2 1067 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 GPRASP2Q96D09 838 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 SCYL1Q96KG9 808 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 CCDC140Q96MF4 163 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 BACH2Q9BYV9 841 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 R3HDMLQ9H3Y0 253 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 CDK11AQ9UQ88 783 aaPredicted RBP3.41□□□□□ -1.86
PTPN12-212ENST00000494248 NPFFR2Q9Y5X5 522 aa3.41□□□□□ -1.86
PTPN12-212ENST00000494248 RHOBTB3O94955 611 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 HSP90B1P14625 803 aaKnown RBP3.4□□□□□ -1.87
PTPN12-212ENST00000494248 NR4A1P22736 598 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 CD38P28907 300 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 GJA8P48165 433 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 HHEXQ03014 270 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 PPP2R5EQ16537 467 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 PPIL6Q8IXY8 311 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 CPLX3Q8WVH0 158 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 HAS1Q92839 578 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 C1orf159Q96HA4 380 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 NELFAQ9H3P2 528 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 MSL2Q9HCI7 577 aa3.4□□□□□ -1.87
PTPN12-212ENST00000494248 COL4A3Q01955 1670 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 KRIT1O00522 736 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 KIAA0355O15063 1070 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 MSCO60682 206 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 FAM20BO75063 409 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 SNRPB2P08579 225 aaKnown RBP3.39□□□□□ -1.87
PTPN12-212ENST00000494248 CDK4P11802 303 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 COL6A2P12110 1019 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 ZNF16P17020 682 aaPredicted RBP3.39□□□□□ -1.87
PTPN12-212ENST00000494248 POU3F3P20264 500 aaPredicted RBP3.39□□□□□ -1.87
PTPN12-212ENST00000494248 CDK11BP21127 795 aaKnown RBP3.39□□□□□ -1.87
PTPN12-212ENST00000494248 KCNQ1P51787 676 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 GFRA1P56159 465 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 SAFB2Q14151 953 aaKnown RBP eCLIP3.39□□□□□ -1.87
PTPN12-212ENST00000494248 USP30Q70CQ3 517 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 ZNF227Q86WZ6 799 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 FAM169BQ8N8A8 192 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 OR14K1Q8NGZ2 314 aa3.39□□□□□ -1.87
PTPN12-212ENST00000494248 NKRFO15226 690 aaKnown RBP eCLIP3.38□□□□□ -1.87
PTPN12-212ENST00000494248 CAPNS1P04632 268 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 ITGAVP06756 1048 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 ADCY8P40145 1251 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 TRIM68Q6AZZ1 485 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 OTOP3Q7RTS5 596 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 LRP10Q7Z4F1 713 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 TMEM145Q8NBT3 493 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 LENG9Q96B70 501 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 CDC42EP3Q9UKI2 254 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 STRIP2Q9ULQ0 834 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 COX11Q9Y6N1 276 aa3.38□□□□□ -1.87
PTPN12-212ENST00000494248 COL3A1P02461 1466 aaPredicted RBP3.37□□□□□ -1.87
PTPN12-212ENST00000494248 CYP27B1O15528 508 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 IGSF3O75054 1194 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 HMGCRP04035 888 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 PTGS2P35354 604 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 NASPP49321 788 aaPredicted RBP3.37□□□□□ -1.87
PTPN12-212ENST00000494248 IL13RA1P78552 427 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 EIF4HQ15056 248 aaKnown RBP3.37□□□□□ -1.87
PTPN12-212ENST00000494248 SLC35F1Q5T1Q4 408 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 MICALCLQ6ZW33 695 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 FILIP1Q7Z7B0 1213 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 C9orf106Q8NAJ2 232 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 BEND2Q8NDZ0 799 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 SHCBP1Q8NEM2 672 aa3.37□□□□□ -1.87
PTPN12-212ENST00000494248 UHMK1Q8TAS1 419 aaKnown RBP3.37□□□□□ -1.87
PTPN12-212ENST00000494248 PPP1R14AQ96A00 147 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms