RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 ARID5BQ14865 1188 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 SDCCAG8Q86SQ7 713 aaPredicted RBP12.65□□□□□ -0.38
COL25A1-204ENST00000494183 DLC1Q96QB1 1528 aa12.65□□□□□ -0.38
COL25A1-204ENST00000494183 SERPING1P05155 500 aa12.65□□□□□ -0.39
COL25A1-204ENST00000494183 SBK1Q52WX2 424 aa12.65□□□□□ -0.39
COL25A1-204ENST00000494183 CEP55Q53EZ4 464 aa12.65□□□□□ -0.39
COL25A1-204ENST00000494183 C10orf67Q8IYJ2 551 aa12.65□□□□□ -0.39
COL25A1-204ENST00000494183 PSPC1Q8WXF1 523 aaKnown RBP12.65□□□□□ -0.39
COL25A1-204ENST00000494183 RAD54LQ92698 747 aa12.65□□□□□ -0.39
COL25A1-204ENST00000494183 ALDH8A1Q9H2A2 487 aaPredicted RBP12.65□□□□□ -0.39
COL25A1-204ENST00000494183 SPDYE16A6NNV3 312 aaPredicted RBP12.64□□□□□ -0.39
COL25A1-204ENST00000494183 I3L4J1 428 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 MOCS3O95396 460 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 NR3C1P04150 777 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 MTMR2Q13614 643 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 SHC4Q6S5L8 630 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 CCNYQ8ND76 341 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 TCP11Q8WWU5 503 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 FAM167AQ96KS9 214 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 HEXIM2Q96MH2 286 aaKnown RBP12.64□□□□□ -0.39
COL25A1-204ENST00000494183 SPZ1Q9BXG8 430 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 DENND3A2RUS2 1198 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 LDHAP00338 332 aaKnown RBP12.64□□□□□ -0.39
COL25A1-204ENST00000494183 USP11P51784 963 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 SNX1Q13596 522 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 SURF1Q15526 300 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 ANKRD20A3Q5VUR7 823 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 RINT1Q6NUQ1 792 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 RFX6Q8HWS3 928 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 HOMER3Q9NSC5 361 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 TYW1Q9NV66 732 aaKnown RBP12.64□□□□□ -0.39
COL25A1-204ENST00000494183 DAAM1Q9Y4D1 1078 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 TAF6LQ9Y6J9 622 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 FAM205CA6NFA0 338 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 FOXN1O15353 648 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 FDX1P10109 184 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 HOXA7P31268 230 aaPredicted RBP12.64□□□□□ -0.39
COL25A1-204ENST00000494183 PHBP35232 272 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 ATP1A2P50993 1020 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 DYNLT1P63172 113 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 COASYQ13057 564 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 ZNF512BQ96KM6 892 aaPredicted RBP12.64□□□□□ -0.39
COL25A1-204ENST00000494183 SH2D3AQ9BRG2 576 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 TECPR2O15040 1411 aa12.64□□□□□ -0.39
COL25A1-204ENST00000494183 IQCA1LA6NCM1 817 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 SGK1O00141 431 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 GMNNO75496 209 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 MYL3P08590 195 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 CALRP27797 417 aaKnown RBP12.63□□□□□ -0.39
COL25A1-204ENST00000494183 ZNF131P52739 623 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 COG2Q14746 738 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 HHIPL2Q6UWX4 724 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 GIMAP8Q8ND71 665 aaPredicted RBP12.63□□□□□ -0.39
COL25A1-204ENST00000494183 RABGGTAQ92696 567 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 LXNQ9BS40 222 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 EPB41L4AQ9HCS5 686 aaPredicted RBP12.63□□□□□ -0.39
COL25A1-204ENST00000494183 CNTNAP4Q9C0A0 1308 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 MED7O43513 233 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 BUB1BO60566 1050 aaPredicted RBP12.63□□□□□ -0.39
COL25A1-204ENST00000494183 SAT1P21673 171 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 OR6B3Q8NGW1 331 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 IL25Q9H293 177 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 ANAPC4Q9UJX5 808 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 DNAJC12Q9UKB3 198 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 PGRMC1O00264 195 aaKnown RBP12.63□□□□□ -0.39
COL25A1-204ENST00000494183 FCER1AP12319 257 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 SFNP31947 248 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 YWHAGP61981 247 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL25A1-204ENST00000494183 ATP2C1P98194 919 aaPredicted RBP12.63□□□□□ -0.39
COL25A1-204ENST00000494183 KCNH2Q12809 1159 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 TTLL4Q14679 1199 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 SGO2Q562F6 1265 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 INTS5Q6P9B9 1019 aaKnown RBP12.63□□□□□ -0.39
COL25A1-204ENST00000494183 C4orf50Q6ZRC1 276 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 FAM213AQ9BRX8 229 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 SLC38A10Q9HBR0 1119 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 EPB41L5Q9HCM4 733 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 RGL1Q9NZL6 768 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 JRKLQ9Y4A0 524 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 LRRD1A4D1F6 860 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 BIRC2Q13490 618 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 PANX2Q96RD6 677 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 ZNF302Q9NR11 478 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 PCDHA13Q9Y5I0 950 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 AGLP35573 1532 aa12.63□□□□□ -0.39
COL25A1-204ENST00000494183 MFAP3LO75121 409 aa12.62□□□□□ -0.39
COL25A1-204ENST00000494183 ENTPD3O75355 529 aa12.62□□□□□ -0.39
COL25A1-204ENST00000494183 HEXIM1O94992 359 aaKnown RBP12.62□□□□□ -0.39
COL25A1-204ENST00000494183 RASA1P20936 1047 aa12.62□□□□□ -0.39
COL25A1-204ENST00000494183 KNOP1Q1ED39 458 aaKnown RBP12.62□□□□□ -0.39
COL25A1-204ENST00000494183 ANGEL2Q5VTE6 544 aaKnown RBP12.62□□□□□ -0.39
COL25A1-204ENST00000494183 TWF2Q6IBS0 349 aaKnown RBP12.62□□□□□ -0.39
COL25A1-204ENST00000494183 DSTYKQ6XUX3 929 aa12.62□□□□□ -0.39
COL25A1-204ENST00000494183 RILPQ96NA2 401 aa12.62□□□□□ -0.39
COL25A1-204ENST00000494183 ELP3Q9H9T3 547 aa12.62□□□□□ -0.39
COL25A1-204ENST00000494183 IFT122Q9HBG6 1241 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms