RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 DISC1Q9NRI5 854 aa16.62■□□□□ 0.25
ATG4B-224ENST00000494132 MSRAQ9UJ68 235 aa16.62■□□□□ 0.25
ATG4B-224ENST00000494132 PCDHA10Q9Y5I2 948 aa16.62■□□□□ 0.25
ATG4B-224ENST00000494132 CYP3A7-CYP3A51PA0A087WV96 503 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 RRN3P2A6NIE6 340 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 WDR64B1ANS9 1081 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 BTBD18B2RXH4 712 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 CCNT1O60563 726 aaKnown RBP16.61■□□□□ 0.25
ATG4B-224ENST00000494132 PSMD10O75832 226 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 BAIAP3O94812 1187 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 PARNO95453 639 aaKnown RBP16.61■□□□□ 0.25
ATG4B-224ENST00000494132 CHRNA1P02708 482 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 MMP1P03956 469 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 CYP3A7P24462 503 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 GRIN2CQ14957 1233 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 RABEP1Q15276 862 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 RAB30Q15771 203 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 UGCGQ16739 394 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 TAF2Q6P1X5 1199 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 DIS3L2Q8IYB7 885 aaKnown RBP16.61■□□□□ 0.25
ATG4B-224ENST00000494132 ETNPPLQ8TBG4 499 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 ATP8B4Q8TF62 1192 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 SLC9A7Q96T83 725 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 RIT2Q99578 217 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 ZNF576Q9H609 170 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 UPF2Q9HAU5 1272 aaKnown RBP16.61■□□□□ 0.25
ATG4B-224ENST00000494132 BRMS1Q9HCU9 246 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 MAFBQ9Y5Q3 323 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-224ENST00000494132 CDY2AQ9Y6F7 541 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 IGSF9BQ9UPX0 1349 aa16.61■□□□□ 0.25
ATG4B-224ENST00000494132 WNT7AO00755 349 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 HBP1O60381 514 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 CD2BP2O95400 341 aaKnown RBP16.6■□□□□ 0.25
ATG4B-224ENST00000494132 GHRP10912 638 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 SLC26A2P50443 739 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 MGAT3Q09327 533 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 TRIM29Q14134 588 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 PLEKHG4Q58EX7 1191 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 MTHFD1LQ6UB35 978 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 MOXD1Q6UVY6 613 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.6■□□□□ 0.25
ATG4B-224ENST00000494132 MIER3Q7Z3K6 550 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 TNFRSF25Q93038 417 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 ZSCAN31Q96LW9 406 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-224ENST00000494132 PPP1R16BQ96T49 567 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 ARID2Q68CP9 1835 aa16.6■□□□□ 0.25
ATG4B-224ENST00000494132 NLRC5Q86WI3 1866 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 ZBTB42B2RXF5 422 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 ZNF862O60290 1169 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 CAND2O75155 1236 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 ARHGEF15O94989 841 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 CA3P07451 260 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 KLRC1P26715 233 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 MRPS6P82932 125 aaKnown RBP16.59■□□□□ 0.25
ATG4B-224ENST00000494132 IKBKEQ14164 716 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 FAM26DQ5JW98 314 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 PPP2R2DQ66LE6 453 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 RSPH3Q86UC2 560 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 HERC6Q8IVU3 1022 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 CERS4Q9HA82 394 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 SLC28A3Q9HAS3 691 aa16.59■□□□□ 0.25
ATG4B-224ENST00000494132 COL4A4P53420 1690 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-224ENST00000494132 TMEM265A0A087WTH1 108 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 ABHD14A-ACY1A0A1B0GW23 586 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 TMEM150BA6NC51 233 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 ATP2B1P20020 1258 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 JAK3P52333 1124 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 PRKCEQ02156 737 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 SPRED2Q7Z698 418 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 MYOCDQ8IZQ8 938 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 BANK1Q8NDB2 785 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 BBXQ8WY36 941 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-224ENST00000494132 SEPT8Q92599 483 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 TNPO1Q92973 898 aaKnown RBP16.58■□□□□ 0.24
ATG4B-224ENST00000494132 C8orf76Q96K31 380 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 IFIH1Q9BYX4 1025 aaKnown RBP16.58■□□□□ 0.24
ATG4B-224ENST00000494132 PRDM12Q9H4Q4 367 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 SH2B1Q9NRF2 756 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-224ENST00000494132 GINS2Q9Y248 185 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 STXBP5LQ9Y2K9 1186 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 PCDHA2Q9Y5H9 948 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 PCDHA11Q9Y5I1 949 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 GTF3C3Q9Y5Q9 886 aa16.58■□□□□ 0.24
ATG4B-224ENST00000494132 COL1A2P08123 1366 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 LCHNA4D1U4 455 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 EML1O00423 815 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 TLL1O43897 1013 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 ST18O60284 1047 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 MARCH6O60337 910 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 SFNP31947 248 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 LPIN1Q14693 890 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 ZNF484Q5JVG2 852 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 FBXO47Q5MNV8 452 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 PPP4R3AQ6IN85 833 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 B3GNT9Q6UX72 402 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 RPAINQ86UA6 219 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 FAM184AQ8NB25 1140 aa16.57■□□□□ 0.24
ATG4B-224ENST00000494132 HAS1Q92839 578 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms