RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 POTEB3A0JP26 581 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 PRPF40AO75400 957 aaKnown RBP16.66■□□□□ 0.26
ACTB-213ENST00000493945 RPLP2P05387 115 aaKnown RBP16.66■□□□□ 0.26
ACTB-213ENST00000493945 ZNF286BP0CG31 522 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 YWHABP31946 246 aaKnown RBP16.66■□□□□ 0.26
ACTB-213ENST00000493945 SYKP43405 635 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 ACLYP53396 1101 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 AMPD3Q01432 767 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 CTTNQ14247 550 aaKnown RBP16.66■□□□□ 0.26
ACTB-213ENST00000493945 MFSD10Q14728 455 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 KCNA10Q16322 511 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 POTEBQ6S5H4 581 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 CATSPER3Q86XQ3 398 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 C7orf31Q8N865 590 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 CRISPLD2Q9H0B8 497 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 STARD7Q9NQZ5 370 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 ANKEF1Q9NU02 776 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 DDX19AQ9NUU7 478 aaKnown RBP16.66■□□□□ 0.26
ACTB-213ENST00000493945 KIAA1024Q9UPX6 916 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 MROH7Q68CQ1 1323 aa16.66■□□□□ 0.26
ACTB-213ENST00000493945 A0A0U1RQG5 324 aaPredicted RBP16.65■□□□□ 0.26
ACTB-213ENST00000493945 ARHGEF35A5YM69 484 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 RRN3P2A6NIE6 340 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 KINO60870 393 aaKnown RBP16.65■□□□□ 0.26
ACTB-213ENST00000493945 SLITRK3O94933 977 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 PSEN2P49810 448 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 FAM160A1Q05DH4 1040 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 PTPN11Q06124 597 aaPredicted RBP16.65■□□□□ 0.26
ACTB-213ENST00000493945 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
ACTB-213ENST00000493945 KIAA0753Q2KHM9 967 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 ZNF484Q5JVG2 852 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 SPECC1Q5M775 1068 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 TMEM63BQ5T3F8 832 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 SHC4Q6S5L8 630 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 EPSTI1Q96J88 318 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 BMP2KQ9NSY1 1161 aaPredicted RBP16.65■□□□□ 0.26
ACTB-213ENST00000493945 RGL1Q9NZL6 768 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 KCND2Q9NZV8 630 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 PHF24Q9UPV7 400 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 SCN10AQ9Y5Y9 1956 aa16.65■□□□□ 0.26
ACTB-213ENST00000493945 POTEFA5A3E0 1075 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 PP2D1A8MPX8 630 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 GAS2O43903 313 aaKnown RBP16.64■□□□□ 0.25
ACTB-213ENST00000493945 MED24O75448 989 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 PFKFB1P16118 471 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 PLCG1P19174 1290 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 MARK3P27448 753 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 RFC5P40937 340 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 GRIN1Q05586 938 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 PPFIA1Q13136 1202 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 TMEM119Q4V9L6 283 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 POTEGQ6S5H5 508 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 CXCL17Q6UXB2 119 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 RETREG2Q8NC44 543 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 SLC7A3Q8WY07 619 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 LARP4BQ92615 738 aaKnown RBP16.64■□□□□ 0.25
ACTB-213ENST00000493945 CHAMP1Q96JM3 812 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 CEP170P1Q96L14 293 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 C16orf70Q9BSU1 422 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 TIPINQ9BVW5 301 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 BCAS3Q9H6U6 928 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 DBR1Q9UK59 544 aaKnown RBP16.64■□□□□ 0.25
ACTB-213ENST00000493945 NRCAMQ92823 1304 aa16.64■□□□□ 0.25
ACTB-213ENST00000493945 KIAA0100Q14667 2235 aaKnown RBP16.64■□□□□ 0.25
ACTB-213ENST00000493945 A0A1W2PQ45 241 aaPredicted RBP16.63■□□□□ 0.25
ACTB-213ENST00000493945 A0A1W2PQY0 241 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 MYADML2A6NDP7 307 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 EYA4O95677 639 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 CDC25AP30304 524 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 MCM4P33991 863 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 CHMP4BP1P59074 171 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 TBC1D8BQ0IIM8 1120 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 TPRNQ4KMQ1 711 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 XKR9Q5GH70 373 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 SV2BQ7L1I2 683 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 PDILTQ8N807 584 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 SYAP1Q96A49 352 aaPredicted RBP16.63■□□□□ 0.25
ACTB-213ENST00000493945 DHX58Q96C10 678 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 MMTAG2Q9BU76 263 aaKnown RBP16.63■□□□□ 0.25
ACTB-213ENST00000493945 NOD1Q9Y239 953 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 ARID2Q68CP9 1835 aa16.63■□□□□ 0.25
ACTB-213ENST00000493945 HTTP42858 3142 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 FAM237AA0A1B0GTK4 181 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 A0A1B0GVL5 298 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 C17orf102A2RUQ5 167 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 CTAGE5O15320 804 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 MAGEB2O15479 319 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 POLR2DO15514 142 aaKnown RBP16.62■□□□□ 0.25
ACTB-213ENST00000493945 DGAT1O75907 488 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 SSBP05455 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
ACTB-213ENST00000493945 KRT18P05783 430 aaKnown RBP16.62■□□□□ 0.25
ACTB-213ENST00000493945 MYL1P05976 194 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 SPATA31C1P0DKV0 1188 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 TMOD1P28289 359 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 DNM2P50570 870 aa16.62■□□□□ 0.25
ACTB-213ENST00000493945 POLGP54098 1239 aaPredicted RBP16.62■□□□□ 0.25
ACTB-213ENST00000493945 PLCB4Q15147 1175 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms