RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 OSBP2Q969R2 916 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 BRIP1Q9BX63 1249 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 PLAAQ9Y263 795 aa21.62■■□□□ 1.05
RNF40-203ENST00000493683 CD2BP2O95400 341 aaKnown RBP21.61■■□□□ 1.05
RNF40-203ENST00000493683 MDM2Q00987 491 aaPredicted RBP21.61■■□□□ 1.05
RNF40-203ENST00000493683 FBXL13Q8NEE6 735 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 PCIF1Q9H4Z3 704 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 TBK1Q9UHD2 729 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 CDR2Q01850 454 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 KCTD1Q719H9 257 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 NFU1Q9UMS0 254 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 FGGP02679 453 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 NUGGCQ68CJ6 796 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 MMS22LQ6ZRQ5 1243 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 RUBCNQ92622 972 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 NBPF3Q9H094 633 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 CPSF1Q10570 1443 aaKnown RBP21.61■■□□□ 1.05
RNF40-203ENST00000493683 MAGI2Q86UL8 1455 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 KRT38O76015 456 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 PAMP19021 973 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 KLHL38Q2WGJ6 581 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 USPL1Q5W0Q7 1092 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 MORC4Q8TE76 937 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 DYNLT1P63172 113 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 TFDP2Q14188 446 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 PGBD1Q96JS3 809 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 FGD4Q96M96 766 aa21.61■■□□□ 1.05
RNF40-203ENST00000493683 DCLK2Q8N568 766 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 PUS7LQ9H0K6 701 aaKnown RBP21.6■■□□□ 1.05
RNF40-203ENST00000493683 PI4KBQ9UBF8 816 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 PTCH1Q13635 1447 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 TTC37Q6PGP7 1564 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 FRMD3A2A2Y4 597 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 NFKBIAP25963 317 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 ABI1Q8IZP0 508 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 GDAP1Q8TB36 358 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 CHAMP1Q96JM3 812 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 PVALEFA0A1B0GWK0 134 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 NCF2P19878 526 aaPredicted RBP21.6■■□□□ 1.05
RNF40-203ENST00000493683 DYNLL1P63167 89 aaKnown RBP21.6■■□□□ 1.05
RNF40-203ENST00000493683 ADCY1Q08828 1119 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 TERF2Q15554 542 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 PPME1Q9Y570 386 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 MMEP08473 750 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 ERICH1Q86X53 443 aa21.6■■□□□ 1.05
RNF40-203ENST00000493683 CHUKO15111 745 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 ZNF189O75820 626 aaPredicted RBP21.59■■□□□ 1.05
RNF40-203ENST00000493683 JAK3P52333 1124 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 CYP27A1Q02318 531 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 MYLK4Q86YV6 388 aaPredicted RBP21.59■■□□□ 1.05
RNF40-203ENST00000493683 CFAP36Q96G28 342 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 FTOQ9C0B1 505 aaKnown RBP eCLIP21.59■■□□□ 1.05
RNF40-203ENST00000493683 NEO1Q92859 1461 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 EEF1DP29692 281 aaKnown RBP21.59■■□□□ 1.05
RNF40-203ENST00000493683 TADA2BQ86TJ2 420 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 AP1M1Q9BXS5 423 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 OSBPL5Q9H0X9 879 aaPredicted RBP21.59■■□□□ 1.05
RNF40-203ENST00000493683 ABHD10Q9NUJ1 306 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 TRPA1O75762 1119 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 CACNB1Q02641 598 aaPredicted RBP21.59■■□□□ 1.05
RNF40-203ENST00000493683 PTPN12Q05209 780 aaKnown RBP21.59■■□□□ 1.05
RNF40-203ENST00000493683 PROSER3Q2NL68 480 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 PPP1R18Q6NYC8 613 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 MAML1Q92585 1016 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 AP5M1Q9H0R1 490 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 KPNA7A9QM74 516 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 COPEO14579 308 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 CTIFO43310 598 aaKnown RBP21.59■■□□□ 1.05
RNF40-203ENST00000493683 TADA3O75528 432 aa21.59■■□□□ 1.05
RNF40-203ENST00000493683 SORBS3O60504 671 aa21.58■■□□□ 1.05
RNF40-203ENST00000493683 ZBTB18Q99592 522 aa21.58■■□□□ 1.05
RNF40-203ENST00000493683 KRT82Q9NSB4 513 aa21.58■■□□□ 1.05
RNF40-203ENST00000493683 GINM1Q9NU53 330 aa21.58■■□□□ 1.05
RNF40-203ENST00000493683 ADAMTS1Q9UHI8 967 aa21.58■■□□□ 1.05
RNF40-203ENST00000493683 EEF1B2P24534 225 aaKnown RBP21.58■■□□□ 1.05
RNF40-203ENST00000493683 SUPT20HL1Q3ZLR7 823 aa21.58■■□□□ 1.05
RNF40-203ENST00000493683 TRIM67Q6ZTA4 783 aa21.58■■□□□ 1.05
RNF40-203ENST00000493683 RPF1Q9H9Y2 349 aaKnown RBP21.58■■□□□ 1.05
RNF40-203ENST00000493683 STOML1Q9UBI4 398 aa21.58■■□□□ 1.05
RNF40-203ENST00000493683 HSPA4LO95757 839 aa21.58■■□□□ 1.04
RNF40-203ENST00000493683 LRRC23Q53EV4 343 aaPredicted RBP21.58■■□□□ 1.04
RNF40-203ENST00000493683 TRIML2Q8N7C3 387 aa21.58■■□□□ 1.04
RNF40-203ENST00000493683 RNF207Q6ZRF8 634 aa21.58■■□□□ 1.04
RNF40-203ENST00000493683 FOXP4Q8IVH2 680 aaPredicted RBP21.58■■□□□ 1.04
RNF40-203ENST00000493683 SUN2Q9UH99 717 aa21.58■■□□□ 1.04
RNF40-203ENST00000493683 WDR64B1ANS9 1081 aa21.57■■□□□ 1.04
RNF40-203ENST00000493683 GPR162Q16538 588 aa21.57■■□□□ 1.04
RNF40-203ENST00000493683 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.57■■□□□ 1.04
RNF40-203ENST00000493683 DCAF4Q8WV16 495 aa21.57■■□□□ 1.04
RNF40-203ENST00000493683 N4BP2L2Q92802 583 aaPredicted RBP21.57■■□□□ 1.04
RNF40-203ENST00000493683 PAPOLAP51003 745 aaKnown RBP21.57■■□□□ 1.04
RNF40-203ENST00000493683 APOL6Q9BWW8 343 aa21.57■■□□□ 1.04
RNF40-203ENST00000493683 NXF1Q9UBU9 619 aaKnown RBP21.57■■□□□ 1.04
RNF40-203ENST00000493683 STRIP2Q9ULQ0 834 aa21.57■■□□□ 1.04
RNF40-203ENST00000493683 ERVK-7P63135 1459 aa21.57■■□□□ 1.04
RNF40-203ENST00000493683 DPP9Q86TI2 863 aa21.57■■□□□ 1.04
RNF40-203ENST00000493683 SCG3Q8WXD2 468 aaKnown RBP21.57■■□□□ 1.04
RNF40-203ENST00000493683 COA7Q96BR5 231 aa21.57■■□□□ 1.04
RNF40-203ENST00000493683 APOBEC2Q9Y235 224 aaKnown RBP21.57■■□□□ 1.04
RNF40-203ENST00000493683 MEIS1O00470 390 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms