RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ZNF746Q6NUN9 644 aaPredicted RBP13.07□□□□□ -0.32
CTSA-209ENST00000493522 SEPT1Q8WYJ6 367 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 KAT2BQ92831 832 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 GLG1Q92896 1179 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 RIT2Q99578 217 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 KCNMB3Q9NPA1 279 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 PCDHA11Q9Y5I1 949 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 EMSYQ7Z589 1322 aa13.07□□□□□ -0.32
CTSA-209ENST00000493522 SCN5AQ14524 2016 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 SIP14410 1827 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 TCHHQ07283 1943 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 WDR64B1ANS9 1081 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 BACH1O14867 736 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 TBX3O15119 743 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 STX6O43752 255 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 BAG4O95429 457 aaKnown RBP13.06□□□□□ -0.32
CTSA-209ENST00000493522 ATP2A2P16615 1042 aaKnown RBP13.06□□□□□ -0.32
CTSA-209ENST00000493522 MARK3P27448 753 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 RABGGTBP53611 331 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 ORC2Q13416 577 aaPredicted RBP13.06□□□□□ -0.32
CTSA-209ENST00000493522 ZNF174Q15697 407 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 NBPF20Q3BBV1 942 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 MIS18BP1Q6P0N0 1132 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 BRAPQ7Z569 592 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 SMAP1Q8IYB5 467 aaPredicted RBP13.06□□□□□ -0.32
CTSA-209ENST00000493522 SCLYQ96I15 445 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 C16orf70Q9BSU1 422 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 UNC45AQ9H3U1 944 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 AZI2Q9H6S1 392 aa13.06□□□□□ -0.32
CTSA-209ENST00000493522 H3BRB1 525 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 PSMD10O75832 226 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 PSAPP07602 524 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 ACTN1P12814 892 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 JAK3P52333 1124 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 RILPL1Q5EBL4 403 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 FAM160B1Q5W0V3 765 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 MIER3Q7Z3K6 550 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 CCDC60Q8IWA6 550 aaPredicted RBP13.05□□□□□ -0.32
CTSA-209ENST00000493522 SLFN12Q8IYM2 578 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 C7orf31Q8N865 590 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 HAS1Q92839 578 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 FAM20AQ96MK3 541 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 SMARCAD1Q9H4L7 1026 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 TUT1Q9H6E5 874 aaKnown RBP13.05□□□□□ -0.32
CTSA-209ENST00000493522 ZNF302Q9NR11 478 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 TRMT13Q9NUP7 481 aaKnown RBP13.05□□□□□ -0.32
CTSA-209ENST00000493522 MTMR6Q9Y217 621 aa13.05□□□□□ -0.32
CTSA-209ENST00000493522 HAS3O00219 553 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 GTPBP6O43824 516 aaPredicted RBP13.04□□□□□ -0.32
CTSA-209ENST00000493522 LGR5O75473 907 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 OR52Z1P0C646 297 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 CYP2C9P11712 490 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 MYOGP15173 224 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 SFNP31947 248 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 RFC2P35250 354 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 TOB1P50616 345 aaPredicted RBP13.04□□□□□ -0.32
CTSA-209ENST00000493522 RESTQ13127 1097 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 AAK1Q2M2I8 961 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 NCAPH2Q6IBW4 605 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 NFRKBQ6P4R8 1299 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 ABHD15Q6UXT9 468 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 PCYT2Q99447 389 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 TMEM60Q9H2L4 133 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 DISC1Q9NRI5 854 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 ERAP1Q9NZ08 941 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 HDAC6Q9UBN7 1215 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 VAV3Q9UKW4 847 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 NOD1Q9Y239 953 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 PCDHB6Q9Y5E3 794 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 PCDHA10Q9Y5I2 948 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 IGSF9BQ9UPX0 1349 aa13.04□□□□□ -0.32
CTSA-209ENST00000493522 PITPNM1O00562 1244 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 ATG7O95352 703 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 SMIM10L2AP0DMW4 78 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 SMIM10L2BP0DMW5 78 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 ANP32AP39687 249 aaKnown RBP13.03□□□□□ -0.32
CTSA-209ENST00000493522 TXKP42681 527 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 STAT5BP51692 787 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 PTPN11Q06124 597 aaPredicted RBP13.03□□□□□ -0.32
CTSA-209ENST00000493522 PPP2R5CQ13362 524 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 SKIV2LQ15477 1246 aaKnown RBP13.03□□□□□ -0.32
CTSA-209ENST00000493522 FOXD4L5Q5VV16 416 aaPredicted RBP13.03□□□□□ -0.32
CTSA-209ENST00000493522 SWSAP1Q6NVH7 229 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 PDXDC2PQ6P474 469 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 DEFB128Q7Z7B8 93 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 RDM1Q8NG50 284 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 FOXD4L4Q8WXT5 416 aaPredicted RBP13.03□□□□□ -0.32
CTSA-209ENST00000493522 VWCEQ96DN2 955 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 SLC9A7Q96T83 725 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 GABBR1Q9UBS5 961 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 GBF1Q92538 1859 aa13.03□□□□□ -0.32
CTSA-209ENST00000493522 IGKV6D-21A0A0A0MT36 114 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 CA3P07451 260 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 PPFIA1Q13136 1202 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 TMEM266Q2M3C6 531 aa13.02□□□□□ -0.33
CTSA-209ENST00000493522 GDF6Q6KF10 455 aaPredicted RBP13.02□□□□□ -0.33
CTSA-209ENST00000493522 SESTD1Q86VW0 696 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms