RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 ABHD14A-ACY1A0A1B0GW23 586 aa20.35■□□□□ 0.85
GTF3C2-212ENST00000493511 MMP1P03956 469 aa20.35■□□□□ 0.85
GTF3C2-212ENST00000493511 HMGN5P82970 282 aaKnown RBP20.35■□□□□ 0.85
GTF3C2-212ENST00000493511 IKBKEQ14164 716 aa20.35■□□□□ 0.85
GTF3C2-212ENST00000493511 RUFY4Q6ZNE9 571 aa20.35■□□□□ 0.85
GTF3C2-212ENST00000493511 MYH9P35579 1960 aaKnown RBP20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 CCNT1O60563 726 aaKnown RBP20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 PSMD10O75832 226 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 PBX2P40425 430 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 NR5A1Q13285 461 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 SAFBQ15424 915 aaKnown RBP eCLIP20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 FAM26DQ5JW98 314 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 KRT40Q6A162 431 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 RDM1Q8NG50 284 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 ETNPPLQ8TBG4 499 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 BBXQ8WY36 941 aaPredicted RBP20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 FAM167AQ96KS9 214 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 TTYH1Q9H313 450 aaPredicted RBP20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 GABBR1Q9UBS5 961 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 PCDHA11Q9Y5I1 949 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 TRANK1O15050 2925 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 COL1A2P08123 1366 aa20.34■□□□□ 0.85
GTF3C2-212ENST00000493511 CHMP2AO43633 222 aa20.33■□□□□ 0.85
GTF3C2-212ENST00000493511 ZNF484Q5JVG2 852 aa20.33■□□□□ 0.85
GTF3C2-212ENST00000493511 DIS3L2Q8IYB7 885 aaKnown RBP20.33■□□□□ 0.85
GTF3C2-212ENST00000493511 DNAJB3Q8WWF6 145 aa20.33■□□□□ 0.85
GTF3C2-212ENST00000493511 SEPT8Q92599 483 aa20.33■□□□□ 0.85
GTF3C2-212ENST00000493511 FAM20AQ96MK3 541 aa20.33■□□□□ 0.85
GTF3C2-212ENST00000493511 FAM49AQ9H0Q0 323 aaPredicted RBP20.33■□□□□ 0.85
GTF3C2-212ENST00000493511 PCDHA2Q9Y5H9 948 aa20.33■□□□□ 0.85
GTF3C2-212ENST00000493511 MYO9BQ13459 2157 aa20.33■□□□□ 0.85
GTF3C2-212ENST00000493511 IGSF9BQ9UPX0 1349 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 KIF28PB7ZC32 967 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 SLC37A4O43826 429 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 FOSBP53539 338 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 WDR5P61964 334 aaKnown RBP20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 PLEKHG4Q58EX7 1191 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 IER5Q5VY09 327 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 MTHFD1LQ6UB35 978 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 MIER3Q7Z3K6 550 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 FAM184AQ8NB25 1140 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 DBF4BQ8NFT6 615 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 TRAPPC12Q8WVT3 735 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 APBB2Q92870 758 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 TNFRSF25Q93038 417 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 GJA10Q969M2 543 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 C8orf76Q96K31 380 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 TBC1D32Q96NH3 1257 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 GUCD1Q96NT3 240 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 UNC45AQ9H3U1 944 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 ZNF576Q9H609 170 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 SLC28A3Q9HAS3 691 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 CEP131Q9UPN4 1083 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 STXBP5LQ9Y2K9 1186 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 EYSQ5T1H1 3165 aa20.32■□□□□ 0.84
GTF3C2-212ENST00000493511 SMIM35A0A1B0GVV1 85 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 BTBD18B2RXH4 712 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 M0QZ92 97 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 TBX3O15119 743 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 MARCH6O60337 910 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 CHRNA1P02708 482 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 ATP4AP20648 1035 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 KLRC1P26715 233 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 RABGGTBP53611 331 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 HERC6Q8IVU3 1022 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 NME8Q8N427 588 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 KCNMB3Q9NPA1 279 aa20.31■□□□□ 0.84
GTF3C2-212ENST00000493511 MRPS6P82932 125 aaKnown RBP20.3■□□□□ 0.84
GTF3C2-212ENST00000493511 EARS2Q5JPH6 523 aaKnown RBP20.3■□□□□ 0.84
GTF3C2-212ENST00000493511 B3GNT9Q6UX72 402 aa20.3■□□□□ 0.84
GTF3C2-212ENST00000493511 ZBTB10Q96DT7 871 aa20.3■□□□□ 0.84
GTF3C2-212ENST00000493511 CDX2Q99626 313 aaPredicted RBP20.3■□□□□ 0.84
GTF3C2-212ENST00000493511 IFIH1Q9BYX4 1025 aaKnown RBP20.3■□□□□ 0.84
GTF3C2-212ENST00000493511 NRBP2Q9NSY0 501 aa20.3■□□□□ 0.84
GTF3C2-212ENST00000493511 YBX2Q9Y2T7 364 aaKnown RBP20.3■□□□□ 0.84
GTF3C2-212ENST00000493511 PRUNE2Q8WUY3 3088 aa20.3■□□□□ 0.84
GTF3C2-212ENST00000493511 FAM205CA6NFA0 338 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 OATP04181 439 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 MCM2P49736 904 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 PRKCEQ02156 737 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 MGAT3Q09327 533 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 TCTN1Q2MV58 587 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 TRMT1LQ7Z2T5 733 aaKnown RBP20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 SLFN12Q8IYM2 578 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 ZBED2Q9BTP6 218 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 NKX2-4Q9H2Z4 354 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 CDY2AQ9Y6F7 541 aa20.29■□□□□ 0.84
GTF3C2-212ENST00000493511 ZBTB42B2RXF5 422 aa20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 BAG4O95429 457 aaKnown RBP20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 AMHP03971 560 aa20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 GHRP10912 638 aa20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 PPP2R5CQ13362 524 aa20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 PPP2R2DQ66LE6 453 aa20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 POTEDQ86YR6 584 aa20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 USP38Q8NB14 1042 aa20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 FBXO18Q8NFZ0 1043 aa20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 SQORQ9Y6N5 450 aa20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 GBF1Q92538 1859 aa20.28■□□□□ 0.84
GTF3C2-212ENST00000493511 MAGEB2O15479 319 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms