RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 EDAQ92838 391 aa24.58■■□□□ 1.53
PFDN4-205ENST00000493356 SLC9A2Q9UBY0 812 aa24.58■■□□□ 1.53
PFDN4-205ENST00000493356 PCDHA6Q9UN73 950 aa24.58■■□□□ 1.53
PFDN4-205ENST00000493356 TRPC6Q9Y210 931 aa24.58■■□□□ 1.53
PFDN4-205ENST00000493356 PCDHA8Q9Y5H6 950 aa24.58■■□□□ 1.53
PFDN4-205ENST00000493356 PCDHA2Q9Y5H9 948 aa24.58■■□□□ 1.53
PFDN4-205ENST00000493356 hCG_1642624A0A1W2PR95 340 aa24.57■■□□□ 1.52
PFDN4-205ENST00000493356 M0QZ92 97 aa24.57■■□□□ 1.52
PFDN4-205ENST00000493356 SH2B2O14492 632 aaPredicted RBP24.57■■□□□ 1.52
PFDN4-205ENST00000493356 SCG2P13521 617 aa24.57■■□□□ 1.52
PFDN4-205ENST00000493356 PAK2Q13177 524 aa24.57■■□□□ 1.52
PFDN4-205ENST00000493356 NFXL1Q6ZNB6 911 aa24.57■■□□□ 1.52
PFDN4-205ENST00000493356 SMRP1Q8NCR6 262 aa24.57■■□□□ 1.52
PFDN4-205ENST00000493356 TRAPPC12Q8WVT3 735 aa24.57■■□□□ 1.52
PFDN4-205ENST00000493356 POF1BQ8WVV4 589 aa24.57■■□□□ 1.52
PFDN4-205ENST00000493356 AZI2Q9H6S1 392 aa24.57■■□□□ 1.52
PFDN4-205ENST00000493356 CCDC69A6NI79 296 aa24.56■■□□□ 1.52
PFDN4-205ENST00000493356 GATMP50440 423 aa24.56■■□□□ 1.52
PFDN4-205ENST00000493356 COASYQ13057 564 aa24.56■■□□□ 1.52
PFDN4-205ENST00000493356 PLCB4Q15147 1175 aa24.56■■□□□ 1.52
PFDN4-205ENST00000493356 TMTC2Q8N394 836 aa24.56■■□□□ 1.52
PFDN4-205ENST00000493356 TNPO1Q92973 898 aaKnown RBP24.56■■□□□ 1.52
PFDN4-205ENST00000493356 TMEM87BQ96K49 555 aa24.56■■□□□ 1.52
PFDN4-205ENST00000493356 CELF4Q9BZC1 486 aaKnown RBP24.56■■□□□ 1.52
PFDN4-205ENST00000493356 KCNH7Q9NS40 1196 aa24.56■■□□□ 1.52
PFDN4-205ENST00000493356 GLP2RO95838 553 aa24.55■■□□□ 1.52
PFDN4-205ENST00000493356 MCM5P33992 734 aa24.55■■□□□ 1.52
PFDN4-205ENST00000493356 NRIP1P48552 1158 aa24.55■■□□□ 1.52
PFDN4-205ENST00000493356 COL9A3Q14050 684 aaPredicted RBP24.55■■□□□ 1.52
PFDN4-205ENST00000493356 TMX1Q9H3N1 280 aa24.55■■□□□ 1.52
PFDN4-205ENST00000493356 KDM3AQ9Y4C1 1321 aa24.55■■□□□ 1.52
PFDN4-205ENST00000493356 SMIM35A0A1B0GVV1 85 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 CALM1P0DP23 149 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 CALM2P0DP24 149 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 CALM3P0DP25 149 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 ACTR2P61160 394 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 PLPPR4Q7Z2D5 763 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 BMP8AQ7Z5Y6 402 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 RBM23Q86U06 439 aaKnown RBP24.54■■□□□ 1.52
PFDN4-205ENST00000493356 RAB11FIP4Q86YS3 637 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 CCDC82Q8N4S0 544 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 CYP2W1Q8TAV3 490 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 MXRA8Q9BRK3 442 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 BARX2Q9UMQ3 279 aaPredicted RBP24.54■■□□□ 1.52
PFDN4-205ENST00000493356 PCDHGC5Q9Y5F6 944 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 NFASCO94856 1347 aa24.54■■□□□ 1.52
PFDN4-205ENST00000493356 FNDC1Q4ZHG4 1894 aaPredicted RBP24.53■■□□□ 1.52
PFDN4-205ENST00000493356 LOC730098B7Z3J9 87 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 LIFRP42702 1097 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 STAT5BP51692 787 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 KRT76Q01546 638 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 TMEM266Q2M3C6 531 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 TMTC3Q6ZXV5 915 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 HEATR3Q7Z4Q2 680 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 NME8Q8N427 588 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 SDF4Q9BRK5 362 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 LRFN2Q9ULH4 789 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 ZDBF2Q9HCK1 2354 aa24.53■■□□□ 1.52
PFDN4-205ENST00000493356 SARSP49591 514 aaKnown RBP24.52■■□□□ 1.52
PFDN4-205ENST00000493356 MTHFD1LQ6UB35 978 aa24.52■■□□□ 1.52
PFDN4-205ENST00000493356 TRIM67Q6ZTA4 783 aa24.52■■□□□ 1.52
PFDN4-205ENST00000493356 USP15Q9Y4E8 981 aaPredicted RBP24.52■■□□□ 1.52
PFDN4-205ENST00000493356 TMEM221A6NGB7 291 aa24.51■■□□□ 1.51
PFDN4-205ENST00000493356 M0R296 226 aa24.51■■□□□ 1.51
PFDN4-205ENST00000493356 PPFIA3O75145 1194 aa24.51■■□□□ 1.51
PFDN4-205ENST00000493356 ARP10275 920 aa24.51■■□□□ 1.51
PFDN4-205ENST00000493356 IBSPP21815 317 aaPredicted RBP24.51■■□□□ 1.51
PFDN4-205ENST00000493356 NFX1Q12986 1120 aaKnown RBP24.51■■□□□ 1.51
PFDN4-205ENST00000493356 ITGB3BPQ13352 177 aaPredicted RBP24.51■■□□□ 1.51
PFDN4-205ENST00000493356 CBX2Q14781 532 aaPredicted RBP24.51■■□□□ 1.51
PFDN4-205ENST00000493356 FANCBQ8NB91 859 aa24.51■■□□□ 1.51
PFDN4-205ENST00000493356 ERVK-5Q9HDB9 667 aa24.51■■□□□ 1.51
PFDN4-205ENST00000493356 SLC12A7Q9Y666 1083 aa24.51■■□□□ 1.51
PFDN4-205ENST00000493356 MGEA5O60502 916 aa24.5■■□□□ 1.51
PFDN4-205ENST00000493356 PRSS33Q8NF86 280 aa24.5■■□□□ 1.51
PFDN4-205ENST00000493356 PBXIP1Q96AQ6 731 aa24.5■■□□□ 1.51
PFDN4-205ENST00000493356 TLE6Q9H808 572 aa24.5■■□□□ 1.51
PFDN4-205ENST00000493356 AGO4Q9HCK5 861 aaKnown RBP24.5■■□□□ 1.51
PFDN4-205ENST00000493356 PCDHB7Q9Y5E2 793 aa24.5■■□□□ 1.51
PFDN4-205ENST00000493356 ATG7O95352 703 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 KLRC1P26715 233 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 SLC26A2P50443 739 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 ZXDAP98168 799 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 UBE3AQ05086 875 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 CEP55Q53EZ4 464 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 WWC2Q6AWC2 1192 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 PGBD1Q96JS3 809 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 PHF7Q9BWX1 381 aaPredicted RBP24.49■■□□□ 1.51
PFDN4-205ENST00000493356 GINS2Q9Y248 185 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 NOC2LQ9Y3T9 749 aaKnown RBP24.49■■□□□ 1.51
PFDN4-205ENST00000493356 PCDHB12Q9Y5F1 795 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 EVPLQ92817 2033 aa24.49■■□□□ 1.51
PFDN4-205ENST00000493356 IGKV6D-21A0A0A0MT36 114 aa24.48■■□□□ 1.51
PFDN4-205ENST00000493356 PER2O15055 1255 aa24.48■■□□□ 1.51
PFDN4-205ENST00000493356 RBM10P98175 930 aaKnown RBP24.48■■□□□ 1.51
PFDN4-205ENST00000493356 SPOUT1Q5T280 376 aaKnown RBP24.48■■□□□ 1.51
PFDN4-205ENST00000493356 IER5LQ5T953 404 aa24.48■■□□□ 1.51
PFDN4-205ENST00000493356 TYW1BQ6NUM6 668 aa24.48■■□□□ 1.51
PFDN4-205ENST00000493356 FAM43BQ6ZT52 329 aaPredicted RBP24.48■■□□□ 1.51
PFDN4-205ENST00000493356 MICU3Q86XE3 530 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms