RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 WAPLQ7Z5K2 1190 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 ZNF354CQ86Y25 554 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 POF1BQ8WVV4 589 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 SSH1Q8WYL5 1049 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 TBCBQ99426 244 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 ERVK13-1Q9NX77 482 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 ADGRE2Q9UHX3 823 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 IPPQ9Y573 584 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 ATP23Q9Y6H3 246 aa5.77□□□□□ -1.49
VPS13A-212ENST00000493341 FAM227AF5H4B4 570 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 LPLP06858 475 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 TRIM14Q14142 442 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 CC2D1AQ6P1N0 951 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-212ENST00000493341 CXorf67Q86X51 503 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-212ENST00000493341 MYLK4Q86YV6 388 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-212ENST00000493341 RBM12BQ8IXT5 1001 aaKnown RBP5.76□□□□□ -1.49
VPS13A-212ENST00000493341 NLGN4XQ8N0W4 816 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 FBXL6Q8N531 539 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 TMEM52Q8NDY8 209 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 C1GALT1C1Q96EU7 318 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 MVB12AQ96EY5 273 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 HSPA12BQ96MM6 686 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 KCNH7Q9NS40 1196 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 RTEL1Q9NZ71 1219 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 NOP53Q9NZM5 478 aaKnown RBP5.76□□□□□ -1.49
VPS13A-212ENST00000493341 USP36Q9P275 1121 aaKnown RBP5.76□□□□□ -1.49
VPS13A-212ENST00000493341 ANAPC4Q9UJX5 808 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 PPP2R3BQ9Y5P8 575 aa5.76□□□□□ -1.49
VPS13A-212ENST00000493341 KLRG2A4D1S0 409 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 C9orf172C9J069 976 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 DHX15O43143 795 aaKnown RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 CLASP2O75122 1294 aaKnown RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 SPATA31C1P0DKV0 1188 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 ENDOUP21128 410 aaKnown RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 FAM193AP78312 1265 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 NKPD1Q17RQ9 610 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 PGS1Q32NB8 556 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 HLA-DQA1Q5Y7H0 255 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 DARS2Q6PI48 645 aaKnown RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 DENND1CQ8IV53 801 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 DLG3Q92796 817 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 ERCC4Q92889 916 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 MEGF10Q96KG7 1140 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 C16orf92Q96LL3 132 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 POFUT1Q9H488 388 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 SLC6A20Q9NP91 592 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 LZTS1Q9Y250 596 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 POLHQ9Y253 713 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 RWDD3Q9Y3V2 267 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 FAM170BA6NMN3 283 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 KRIT1O00522 736 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 PPP1R11O60927 126 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 TUSC2O75896 110 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 HRGP04196 525 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 HABP4Q5JVS0 413 aaKnown RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 ZNF787Q6DD87 383 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 CLEC4GQ6UXB4 293 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 KCNK18Q7Z418 384 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 ZAR1Q86SH2 424 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 CREG2Q8IUH2 290 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 DZIP1LQ8IYY4 767 aaKnown RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 THEMISQ8N1K5 641 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 FAM181AQ8N9Y4 354 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 GATA6Q92908 595 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 COA7Q96BR5 231 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 B3GNT5Q9BYG0 378 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 TMX4Q9H1E5 349 aaPredicted RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 BHMT2Q9H2M3 363 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 NGRNQ9NPE2 291 aaKnown RBP5.75□□□□□ -1.49
VPS13A-212ENST00000493341 ZNF281Q9Y2X9 895 aa5.75□□□□□ -1.49
VPS13A-212ENST00000493341 UBXN7O94888 489 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 APOL3O95236 402 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 MTHFD2P13995 350 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 MANFP55145 182 aaKnown RBP5.74□□□□□ -1.49
VPS13A-212ENST00000493341 ALDH6A1Q02252 535 aaKnown RBP5.74□□□□□ -1.49
VPS13A-212ENST00000493341 FOXD4Q12950 439 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-212ENST00000493341 IFIT5Q13325 482 aaKnown RBP5.74□□□□□ -1.49
VPS13A-212ENST00000493341 SEMA5AQ13591 1074 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 SLC9A5Q14940 896 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 GAB4Q2WGN9 574 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 ZNF385CQ66K41 422 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-212ENST00000493341 KCTD1Q719H9 257 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 CLEC10AQ8IUN9 316 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 SHISA5Q8N114 240 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 C7orf31Q8N865 590 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 SGCZQ96LD1 299 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 TMEM60Q9H2L4 133 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 RSAD1Q9HA92 442 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 RIC8BQ9NVN3 520 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 X6R8D5 127 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 HMX2A2RU54 273 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 H3BML4 177 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 DTNBO60941 627 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 ALDH2P05091 517 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 PEX2P28328 305 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 TM4SF4P48230 202 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 SLC5A3P53794 718 aa5.74□□□□□ -1.49
VPS13A-212ENST00000493341 EGR3Q06889 387 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms