RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 GIPRP48546 466 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 RGS3P49796 1198 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 EIF6P56537 245 aaKnown RBP8.32□□□□□ -1.08
TPR-208ENST00000492973 CAVIN4Q5BKX8 364 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 DACT2Q5SW24 774 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 NBPF12Q5TAG4 269 aaPredicted RBP8.32□□□□□ -1.08
TPR-208ENST00000492973 CIAPIN1Q6FI81 312 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 RUFY4Q6ZNE9 571 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 AACSQ86V21 672 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 TP53INP2Q8IXH6 220 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 TMEM192Q8IY95 271 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 MXD3Q9BW11 206 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 SRRTQ9BXP5 876 aaKnown RBP8.32□□□□□ -1.08
TPR-208ENST00000492973 GPR62Q9BZJ7 368 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 LRRCC1Q9C099 1032 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 DUSP15Q9H1R2 295 aaPredicted RBP8.32□□□□□ -1.08
TPR-208ENST00000492973 ATP13A1Q9HD20 1204 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 KCNH3Q9ULD8 1083 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 JAG2Q9Y219 1238 aa8.32□□□□□ -1.08
TPR-208ENST00000492973 FAM205AQ6ZU69 1335 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 SPEF2Q9C093 1822 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 YY1P25490 414 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 GMPSP49915 693 aaPredicted RBP8.31□□□□□ -1.08
TPR-208ENST00000492973 RNF4P78317 190 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 TNIP1Q15025 636 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 STRIP1Q5VSL9 837 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 ANGEL2Q5VTE6 544 aaKnown RBP8.31□□□□□ -1.08
TPR-208ENST00000492973 VPS37DQ86XT2 251 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 GPC2Q8N158 579 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 CLASRPQ8N2M8 674 aaKnown RBP8.31□□□□□ -1.08
TPR-208ENST00000492973 CERS5Q8N5B7 392 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 SHDQ96IW2 340 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 SLC6A18Q96N87 628 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 GMLQ99445 158 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 CAPN10Q9HC96 672 aa8.31□□□□□ -1.08
TPR-208ENST00000492973 COL1A1P02452 1464 aaPredicted RBP8.31□□□□□ -1.08
TPR-208ENST00000492973 SHTN1A0MZ66 631 aa8.3□□□□□ -1.08
TPR-208ENST00000492973 CLEC3AO75596 197 aa8.3□□□□□ -1.08
TPR-208ENST00000492973 GUCY2CP25092 1073 aa8.3□□□□□ -1.08
TPR-208ENST00000492973 CHAF1AQ13111 956 aaPredicted RBP8.3□□□□□ -1.08
TPR-208ENST00000492973 RASGRF1Q13972 1273 aa8.3□□□□□ -1.08
TPR-208ENST00000492973 GORABQ5T7V8 394 aa8.3□□□□□ -1.08
TPR-208ENST00000492973 TTLL5Q6EMB2 1281 aa8.3□□□□□ -1.08
TPR-208ENST00000492973 OTUD7AQ8TE49 926 aaPredicted RBP8.3□□□□□ -1.08
TPR-208ENST00000492973 ZNF526Q8TF50 670 aaPredicted RBP8.3□□□□□ -1.08
TPR-208ENST00000492973 UBE2FQ969M7 185 aa8.3□□□□□ -1.08
TPR-208ENST00000492973 GNL3LQ9NVN8 582 aaKnown RBP8.3□□□□□ -1.08
TPR-208ENST00000492973 HMG20BQ9P0W2 317 aa8.3□□□□□ -1.08
TPR-208ENST00000492973 STRIP2Q9ULQ0 834 aa8.3□□□□□ -1.08
TPR-208ENST00000492973 A0A1B0GUL6 1792 aa8.3□□□□□ -1.08
TPR-208ENST00000492973 SALL3Q9BXA9 1300 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 IFIT2P09913 472 aaKnown RBP8.29□□□□□ -1.08
TPR-208ENST00000492973 UQCRFS1P1P0C7P4 283 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 MCAMP43121 646 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 CHMP4BP1P59074 171 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 FKBP1AP62942 108 aaKnown RBP8.29□□□□□ -1.08
TPR-208ENST00000492973 IKZF1Q13422 519 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 ZYXQ15942 572 aaKnown RBP8.29□□□□□ -1.08
TPR-208ENST00000492973 GAB4Q2WGN9 574 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 CBLL1Q75N03 491 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 OR6P1Q8NGX9 317 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 DPF2Q92785 391 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 ZNF512BQ96KM6 892 aaPredicted RBP8.29□□□□□ -1.08
TPR-208ENST00000492973 NMRK2Q9NPI5 230 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 ZSWIM5Q9P217 1185 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 ADGRE2Q9UHX3 823 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 DENND2AQ9ULE3 1009 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 SBF1O95248 1867 aa8.29□□□□□ -1.08
TPR-208ENST00000492973 PDS5AQ29RF7 1337 aaKnown RBP8.29□□□□□ -1.08
TPR-208ENST00000492973 WASH4PA8MWX3 477 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 FRAT2O75474 233 aaPredicted RBP8.28□□□□□ -1.08
TPR-208ENST00000492973 RPS12P25398 132 aaKnown RBP8.28□□□□□ -1.08
TPR-208ENST00000492973 EPS15P42566 896 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 ZNF280AP59817 542 aaPredicted RBP8.28□□□□□ -1.08
TPR-208ENST00000492973 GNL2Q13823 731 aaKnown RBP8.28□□□□□ -1.08
TPR-208ENST00000492973 PLCL1Q15111 1095 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 NBPF9Q3BBW0 867 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 CCDC158Q5M9N0 1113 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 TTC39AQ5SRH9 613 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 TSHZ3Q63HK5 1081 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 UNC5AQ6ZN44 842 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 TMPRSS7Q7RTY8 843 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 C19orf47Q8N9M1 422 aaKnown RBP8.28□□□□□ -1.08
TPR-208ENST00000492973 SPATA5Q8NB90 893 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 AGBL3Q8NEM8 1001 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 TRIT1Q9H3H1 467 aaKnown RBP8.28□□□□□ -1.08
TPR-208ENST00000492973 GPATCH2Q9NW75 528 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 GPRC5DQ9NZD1 345 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 LMCD1Q9NZU5 365 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 SUCOQ9UBS9 1254 aaKnown RBP8.28□□□□□ -1.08
TPR-208ENST00000492973 STAP2Q9UGK3 403 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 CNOT7Q9UIV1 285 aaKnown RBP8.28□□□□□ -1.08
TPR-208ENST00000492973 ADAMTS6Q9UKP5 1117 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 SALL1Q9NSC2 1324 aa8.28□□□□□ -1.08
TPR-208ENST00000492973 SHISA3A0PJX4 238 aa8.27□□□□□ -1.09
TPR-208ENST00000492973 ATP5JP18859 108 aa8.27□□□□□ -1.09
TPR-208ENST00000492973 PDE1AP54750 535 aa8.27□□□□□ -1.09
TPR-208ENST00000492973 MFSD14BQ5SR56 506 aa8.27□□□□□ -1.09
TPR-208ENST00000492973 TSPYL5Q86VY4 417 aaPredicted RBP8.27□□□□□ -1.09
TPR-208ENST00000492973 WDR66Q8TBY9 1149 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms