RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 C4orf32Q8N8J7 132 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 TRAPPC12Q8WVT3 735 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 DHX38Q92620 1227 aaKnown RBP15.69■□□□□ 0.1
CCM2-217ENST00000492883 ZSCAN16Q9H4T2 348 aaPredicted RBP15.69■□□□□ 0.1
CCM2-217ENST00000492883 RGL1Q9NZL6 768 aa15.69■□□□□ 0.1
CCM2-217ENST00000492883 IGSF9BQ9UPX0 1349 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 DDX11L8A8MPP1 907 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 LAD1O00515 517 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 IQCF3P0C7M6 154 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 CKBP12277 381 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 SELPP16109 830 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 KLRC1P26715 233 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 RESTQ13127 1097 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 PPIGQ13427 754 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCM2-217ENST00000492883 CTTNQ14247 550 aaKnown RBP15.68■□□□□ 0.1
CCM2-217ENST00000492883 XKR3Q5GH77 459 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 MARCH8Q5T0T0 291 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 TAF2Q6P1X5 1199 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 MTHFD1LQ6UB35 978 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 TPH2Q8IWU9 490 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 WNT8BQ93098 351 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 SCLYQ96I15 445 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 DYDC2Q96IM9 177 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 EIF2AK1Q9BQI3 630 aaKnown RBP15.68■□□□□ 0.1
CCM2-217ENST00000492883 WNT8AQ9H1J5 351 aa15.68■□□□□ 0.1
CCM2-217ENST00000492883 SEPT9Q9UHD8 586 aaPredicted RBP15.68■□□□□ 0.1
CCM2-217ENST00000492883 COLQQ9Y215 455 aaPredicted RBP15.68■□□□□ 0.1
CCM2-217ENST00000492883 COL1A2P08123 1366 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 MBLAC1A4D2B0 266 aaPredicted RBP15.67■□□□□ 0.1
CCM2-217ENST00000492883 POTEMA6NI47 508 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 SLITRK3O94933 977 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 BMP8BP34820 402 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 CYP4A11Q02928 519 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 TRIM71Q2Q1W2 868 aaKnown RBP15.67■□□□□ 0.1
CCM2-217ENST00000492883 ZNF618Q5T7W0 954 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 FOXD4L5Q5VV16 416 aaPredicted RBP15.67■□□□□ 0.1
CCM2-217ENST00000492883 DTHD1Q6ZMT9 781 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 RUFY4Q6ZNE9 571 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 LRRC8DQ7L1W4 858 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 RSPH3Q86UC2 560 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 RPUSD2Q8IZ73 545 aaKnown RBP15.67■□□□□ 0.1
CCM2-217ENST00000492883 ERMNQ8TAM6 284 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 DNAJB3Q8WWF6 145 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 FOXD4L4Q8WXT5 416 aaPredicted RBP15.67■□□□□ 0.1
CCM2-217ENST00000492883 ZBTB10Q96DT7 871 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 LXNQ9BS40 222 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 RAB34Q9BZG1 259 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 FAM49AQ9H0Q0 323 aaPredicted RBP15.67■□□□□ 0.1
CCM2-217ENST00000492883 ZSWIM4Q9H7M6 989 aa15.67■□□□□ 0.1
CCM2-217ENST00000492883 SCN10AQ9Y5Y9 1956 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 ACRP10323 421 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCM2-217ENST00000492883 RBL2Q08999 1139 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 FAM173BQ6P4H8 233 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 OTUD6AQ7L8S5 288 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 DEFB128Q7Z7B8 93 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 C4orf19Q8IY42 314 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 METTL13Q8N6R0 699 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 NEK9Q8TD19 979 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 HSD17B14Q9BPX1 270 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 NIFKQ9BYG3 293 aaKnown RBP15.66■□□□□ 0.1
CCM2-217ENST00000492883 LRWD1Q9UFC0 647 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 PCDHA2Q9Y5H9 948 aa15.66■□□□□ 0.1
CCM2-217ENST00000492883 SMIM35A0A1B0GVV1 85 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 RSPH10B2B2RC85 870 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 ZBTB42B2RXF5 422 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 MAGEB2O15479 319 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 CAND2O75155 1236 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 STBD1O95210 358 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 PARNO95453 639 aaKnown RBP15.65■□□□□ 0.1
CCM2-217ENST00000492883 BMP15O95972 392 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 RPLP2P05387 115 aaKnown RBP15.65■□□□□ 0.1
CCM2-217ENST00000492883 CTSHP09668 335 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 RSPH10BP0C881 870 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 ZSCAN22P10073 491 aaPredicted RBP15.65■□□□□ 0.1
CCM2-217ENST00000492883 RFC2P35250 354 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 PRPHP41219 470 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 EPHB4P54760 987 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 ATP2C1P98194 919 aaPredicted RBP15.65■□□□□ 0.1
CCM2-217ENST00000492883 PDIA5Q14554 519 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 SF3A1Q15459 793 aaKnown RBP15.65■□□□□ 0.1
CCM2-217ENST00000492883 MTERF2Q49AM1 385 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 FTOQ9C0B1 505 aaKnown RBP eCLIP15.65■□□□□ 0.1
CCM2-217ENST00000492883 IL23AQ9NPF7 189 aa15.65■□□□□ 0.1
CCM2-217ENST00000492883 WRAP73Q9P2S5 460 aaPredicted RBP15.65■□□□□ 0.1
CCM2-217ENST00000492883 MKI67P46013 3256 aaKnown RBP15.64■□□□□ 0.09
CCM2-217ENST00000492883 TMEM150BA6NC51 233 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 C22orf31O95567 290 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 YWHABP31946 246 aaKnown RBP15.64■□□□□ 0.09
CCM2-217ENST00000492883 TBC1D8BQ0IIM8 1120 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 IL17AQ16552 155 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 ARL6IP4Q66PJ3 421 aaKnown RBP15.64■□□□□ 0.09
CCM2-217ENST00000492883 ANO5Q75V66 913 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 RPAINQ86UA6 219 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 NME8Q8N427 588 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 CEP170P1Q96L14 293 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 SH2D3AQ9BRG2 576 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 PRO3102Q9H379 93 aa15.64■□□□□ 0.09
CCM2-217ENST00000492883 SUGCTQ9HAC7 445 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms