RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 DIAPH3Q9NSV4 1193 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 CHMP5Q9NZZ3 219 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 TUBE1Q9UJT0 475 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 USP15Q9Y4E8 981 aaPredicted RBP15.07■□□□□ 0
HDAC3-213ENST00000492506 MYO10Q9HD67 2058 aa15.07■□□□□ 0
HDAC3-213ENST00000492506 MEIS2O14770 477 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 ST18O60284 1047 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 KCNA2P16389 499 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 CD52P31358 61 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 NRIP1P48552 1158 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 MRPS6P82932 125 aaKnown RBP15.06■□□□□ 0
HDAC3-213ENST00000492506 XRRA1Q6P2D8 792 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 USP17L6PQ6QN14 398 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 SMC5Q8IY18 1101 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 POF1BQ8WVV4 589 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 ASIC4Q96FT7 647 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 ERAP1Q9NZ08 941 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 BARX2Q9UMQ3 279 aaPredicted RBP15.06■□□□□ 0
HDAC3-213ENST00000492506 PCDHGC5Q9Y5F6 944 aa15.06■□□□□ 0
HDAC3-213ENST00000492506 EVPLQ92817 2033 aa15.05■□□□□ 0
HDAC3-213ENST00000492506 PIK3CDO00329 1044 aa15.05■□□□□ -0
HDAC3-213ENST00000492506 VCPP55072 806 aaKnown RBP15.05■□□□□ -0
HDAC3-213ENST00000492506 SIGLEC14Q08ET2 396 aa15.05■□□□□ -0
HDAC3-213ENST00000492506 RBM23Q86U06 439 aaKnown RBP15.05■□□□□ -0
HDAC3-213ENST00000492506 RSPH3Q86UC2 560 aa15.05■□□□□ -0
HDAC3-213ENST00000492506 NPAS4Q8IUM7 802 aa15.05■□□□□ -0
HDAC3-213ENST00000492506 SUGP1Q8IWZ8 645 aaKnown RBP15.05■□□□□ -0
HDAC3-213ENST00000492506 GIMAP8Q8ND71 665 aaPredicted RBP15.05■□□□□ -0
HDAC3-213ENST00000492506 VN1R2Q8NFZ6 395 aa15.05■□□□□ -0
HDAC3-213ENST00000492506 PPP2R3CQ969Q6 453 aa15.05■□□□□ -0
HDAC3-213ENST00000492506 SQORQ9Y6N5 450 aa15.05■□□□□ -0
HDAC3-213ENST00000492506 DCHS1Q96JQ0 3298 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 HIP1O00291 1037 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 ITGB5P18084 799 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 MARK3P27448 753 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 GATMP50440 423 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 PAN2Q504Q3 1202 aaKnown RBP15.04■□□□□ -0
HDAC3-213ENST00000492506 NLRX1Q86UT6 975 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 ZSCAN30Q86W11 494 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 ATP8B4Q8TF62 1192 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 SEPT1Q8WYJ6 367 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 SUSD6Q92537 303 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 PHF7Q9BWX1 381 aaPredicted RBP15.04■□□□□ -0
HDAC3-213ENST00000492506 FTHL17Q9BXU8 183 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 WDR87Q6ZQQ6 2873 aa15.04■□□□□ -0
HDAC3-213ENST00000492506 IGSF9BQ9UPX0 1349 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 DYNC1I1O14576 645 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 ATF7P17544 494 aaPredicted RBP15.03■□□□□ -0
HDAC3-213ENST00000492506 CHD1LQ86WJ1 897 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 SMARCC2Q8TAQ2 1214 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 PIBF1Q8WXW3 757 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 GPRASP2Q96D09 838 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 PCYT2Q99447 389 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 FAM49AQ9H0Q0 323 aaPredicted RBP15.03■□□□□ -0
HDAC3-213ENST00000492506 TMX1Q9H3N1 280 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 FAM86C1Q9NVL1 165 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 PADI3Q9ULW8 664 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 TAF6LQ9Y6J9 622 aa15.03■□□□□ -0
HDAC3-213ENST00000492506 RIF1Q5UIP0 2472 aaKnown RBP15.03■□□□□ -0
HDAC3-213ENST00000492506 PTPRZ1P23471 2315 aaPredicted RBP15.02■□□□□ -0
HDAC3-213ENST00000492506 IFIT3O14879 490 aaKnown RBP15.02■□□□□ -0
HDAC3-213ENST00000492506 PER2O15055 1255 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 CYP21A2P08686 494 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 SCG2P13521 617 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 INSRRP14616 1297 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 IGBP1P78318 339 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 KCNC3Q14003 757 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 IER5Q5VY09 327 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 GLG1Q92896 1179 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 RPGRIP1Q96KN7 1286 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 SMARCAD1Q9H4L7 1026 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 TLE6Q9H808 572 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 TRPV2Q9Y5S1 764 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 UBIAD1Q9Y5Z9 338 aa15.02■□□□□ -0
HDAC3-213ENST00000492506 KDM3AQ9Y4C1 1321 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 RRN3P2A6NIE6 340 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 TRAK2O60296 914 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 GFRA3O60609 400 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 KIF20AO95235 890 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 RPLP2P05387 115 aaKnown RBP15.01□□□□□ -0.01
HDAC3-213ENST00000492506 STAG3L1P0CL83 205 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 AVPR2P30518 371 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 MCM5P33992 734 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 NUCB1Q02818 461 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 TMEM62Q0P6H9 643 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 WTAPQ15007 396 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 CDHR1Q96JP9 859 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 PPP1R9BQ96SB3 815 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 SPZ1Q9BXG8 430 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
HDAC3-213ENST00000492506 PCDHA2Q9Y5H9 948 aa15.01□□□□□ -0.01
HDAC3-213ENST00000492506 PPFIA3O75145 1194 aa15□□□□□ -0.01
HDAC3-213ENST00000492506 ANTXR2P58335 489 aa15□□□□□ -0.01
HDAC3-213ENST00000492506 ERVFC1P60507 584 aa15□□□□□ -0.01
HDAC3-213ENST00000492506 UBE3AQ05086 875 aa15□□□□□ -0.01
HDAC3-213ENST00000492506 TRDNQ13061 729 aa15□□□□□ -0.01
HDAC3-213ENST00000492506 PAK2Q13177 524 aa15□□□□□ -0.01
HDAC3-213ENST00000492506 PTPN21Q16825 1174 aa15□□□□□ -0.01
HDAC3-213ENST00000492506 DUSP6Q16828 381 aa15□□□□□ -0.01
HDAC3-213ENST00000492506 TMEM184AQ6ZMB5 413 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms