RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 MSH4O15457 936 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 CAND2O75155 1236 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 TDP2O95551 362 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 FDPSP14324 419 aaKnown RBP13.37□□□□□ -0.27
MDC1-207ENST00000492462 NEK4P51957 841 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 SETQ01105 290 aaPredicted RBP13.37□□□□□ -0.27
MDC1-207ENST00000492462 TAP1Q03518 808 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 MGAT3Q09327 533 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 IKBKEQ14164 716 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 SWSAP1Q6NVH7 229 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 TAF2Q6P1X5 1199 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 DAGLBQ8NCG7 672 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 OXER1Q8TDS5 423 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 PRRC2BQ5JSZ5 2229 aaKnown RBP13.37□□□□□ -0.27
MDC1-207ENST00000492462 STK36Q9NRP7 1315 aa13.37□□□□□ -0.27
MDC1-207ENST00000492462 REV3LO60673 3130 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 POTEB3A0JP26 581 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 TLL1O43897 1013 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 GHRP10912 638 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 USP11P51784 963 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 TMEM62Q0P6H9 643 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 ST3GAL1Q11201 340 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 C8orf34Q49A92 452 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 POTEBQ6S5H4 581 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 TRMT1LQ7Z2T5 733 aaKnown RBP13.36□□□□□ -0.27
MDC1-207ENST00000492462 RPAINQ86UA6 219 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 GTF3C6Q969F1 213 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 UHRF1Q96T88 793 aaPredicted RBP13.36□□□□□ -0.27
MDC1-207ENST00000492462 PHF20Q9BVI0 1012 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 ZNF302Q9NR11 478 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 TBC1D22BQ9NU19 505 aa13.36□□□□□ -0.27
MDC1-207ENST00000492462 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
MDC1-207ENST00000492462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.35□□□□□ -0.27
MDC1-207ENST00000492462 FAM205CA6NFA0 338 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 RRN3P2A6NIE6 340 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 ZBTB42B2RXF5 422 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 JAK2O60674 1132 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 CDKL5O76039 1030 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 GJB5O95377 273 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 LPIN1Q14693 890 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 ANKRD1Q15327 319 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 INF2Q27J81 1249 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 EARS2Q5JPH6 523 aaKnown RBP13.35□□□□□ -0.27
MDC1-207ENST00000492462 FAM160B1Q5W0V3 765 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 ZNF746Q6NUN9 644 aaPredicted RBP13.35□□□□□ -0.27
MDC1-207ENST00000492462 PDXDC2PQ6P474 469 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 MTHFD1LQ6UB35 978 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 ATP8B4Q8TF62 1192 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 SEPT8Q92599 483 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 SLC5A5Q92911 643 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 ZBED2Q9BTP6 218 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 CDY2AQ9Y6F7 541 aa13.35□□□□□ -0.27
MDC1-207ENST00000492462 KIF28PB7ZC32 967 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 CHMP2AO43633 222 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 IGFBP4P22692 258 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 KLRC1P26715 233 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 FOSBP53539 338 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 MRPS6P82932 125 aaKnown RBP13.34□□□□□ -0.27
MDC1-207ENST00000492462 KRT76Q01546 638 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 NONOQ15233 471 aaKnown RBP eCLIP13.34□□□□□ -0.27
MDC1-207ENST00000492462 UGCGQ16739 394 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 FBXO47Q5MNV8 452 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 GALNT17Q6IS24 598 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 MYOCDQ8IZQ8 938 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 NSUN7Q8NE18 718 aaKnown RBP13.34□□□□□ -0.27
MDC1-207ENST00000492462 ATXN2LQ8WWM7 1075 aaKnown RBP13.34□□□□□ -0.27
MDC1-207ENST00000492462 PPM1EQ8WY54 764 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 MBOAT7Q96N66 472 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 GAS2L1Q99501 681 aaPredicted RBP13.34□□□□□ -0.27
MDC1-207ENST00000492462 KIF2CQ99661 725 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 LRFN3Q9BTN0 628 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 IFIH1Q9BYX4 1025 aaKnown RBP13.34□□□□□ -0.27
MDC1-207ENST00000492462 UNC45AQ9H3U1 944 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 AGO3Q9H9G7 860 aaKnown RBP13.34□□□□□ -0.27
MDC1-207ENST00000492462 GABBR1Q9UBS5 961 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 PCDHA10Q9Y5I2 948 aa13.34□□□□□ -0.27
MDC1-207ENST00000492462 MAFBQ9Y5Q3 323 aaPredicted RBP13.34□□□□□ -0.27
MDC1-207ENST00000492462 CYP3A7-CYP3A51PA0A087WV96 503 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 SLC37A4O43826 429 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 ZNF862O60290 1169 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 HBP1O60381 514 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 GAS7O60861 476 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 EFCAB14O75071 495 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 PSMD10O75832 226 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 UPP2O95045 317 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 PSAPP07602 524 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 CYP3A7P24462 503 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 SLC26A2P50443 739 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 CCDC85BQ15834 202 aaPredicted RBP13.33□□□□□ -0.28
MDC1-207ENST00000492462 Q4G0T1 1027 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 LRCH2Q5VUJ6 765 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 KRT40Q6A162 431 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 KRT25Q7Z3Z0 450 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 CKAP2LQ8IYA6 745 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 SMAP1Q8IYB5 467 aaPredicted RBP13.33□□□□□ -0.28
MDC1-207ENST00000492462 ARNTL2Q8WYA1 636 aa13.33□□□□□ -0.28
MDC1-207ENST00000492462 ASB2Q96Q27 587 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms